RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 BCL2A1Q16548 175 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 CHRFAM7AQ494W8 412 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 OR52E8Q6IFG1 317 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 GRHL2Q6ISB3 625 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 CYP20A1Q6UW02 462 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 PLCZ1Q86YW0 608 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 PDIK1LQ8N165 341 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 ZNF610Q8N9Z0 462 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 SPC24Q8NBT2 197 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 FIG4Q92562 907 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 CAB39LQ9H9S4 337 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 PSD3Q9NYI0 1048 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 MOCS1Q9NZB8 636 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 EHD3Q9NZN3 535 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 ASIC3Q9UHC3 531 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 MTO1Q9Y2Z2 717 aaKnown RBP10.25□□□□□ -0.77
BRCA1-213ENST00000476777 MRPS18CQ9Y3D5 142 aaKnown RBP10.25□□□□□ -0.77
BRCA1-213ENST00000476777 TSC22D4Q9Y3Q8 395 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 B4DXG7 233 aa10.24□□□□□ -0.77
BRCA1-213ENST00000476777 OVOL3O00110 214 aa10.24□□□□□ -0.77
BRCA1-213ENST00000476777 ACOX3O15254 700 aa10.24□□□□□ -0.77
BRCA1-213ENST00000476777 PHGDHO43175 533 aaKnown RBP10.24□□□□□ -0.77
BRCA1-213ENST00000476777 CPMP14384 443 aa10.24□□□□□ -0.77
BRCA1-213ENST00000476777 NT5EP21589 574 aa10.24□□□□□ -0.77
BRCA1-213ENST00000476777 TCEA1P23193 301 aaKnown RBP10.24□□□□□ -0.77
BRCA1-213ENST00000476777 PTX3P26022 381 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-213ENST00000476777 XKP51811 444 aa10.24□□□□□ -0.77
BRCA1-213ENST00000476777 SLC12A2P55011 1212 aa10.24□□□□□ -0.77
BRCA1-213ENST00000476777 B3GALT5-AS1P59052 145 aa10.24□□□□□ -0.77
BRCA1-213ENST00000476777 PLCXD2Q0VAA5 305 aa10.24□□□□□ -0.77
BRCA1-213ENST00000476777 MGAT2Q10469 447 aa10.24□□□□□ -0.77
BRCA1-213ENST00000476777 GUSBP1Q15486 140 aa10.24□□□□□ -0.77
BRCA1-213ENST00000476777 ETFDHQ16134 617 aa10.24□□□□□ -0.77
BRCA1-213ENST00000476777 CHMP1BQ7LBR1 199 aa10.24□□□□□ -0.77
BRCA1-213ENST00000476777 MILR1Q7Z6M3 343 aa10.24□□□□□ -0.77
BRCA1-213ENST00000476777 OR4K14Q8NGD5 310 aa10.24□□□□□ -0.77
BRCA1-213ENST00000476777 EXT2Q93063 718 aa10.24□□□□□ -0.77
BRCA1-213ENST00000476777 LRRC39Q96DD0 335 aa10.24□□□□□ -0.77
BRCA1-213ENST00000476777 LCORQ96JN0 433 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-213ENST00000476777 PBKQ96KB5 322 aa10.24□□□□□ -0.77
BRCA1-213ENST00000476777 NAP1L3Q99457 506 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-213ENST00000476777 TMEM204Q9BSN7 226 aa10.24□□□□□ -0.77
BRCA1-213ENST00000476777 ITPAQ9BY32 194 aa10.24□□□□□ -0.77
BRCA1-213ENST00000476777 KLHL4Q9C0H6 718 aa10.24□□□□□ -0.77
BRCA1-213ENST00000476777 RNF122Q9H9V4 155 aa10.24□□□□□ -0.77
BRCA1-213ENST00000476777 LAMP3Q9UQV4 416 aa10.24□□□□□ -0.77
BRCA1-213ENST00000476777 H0YC42 278 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 K7EPI3 171 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 PGRMC1O00264 195 aaKnown RBP10.23□□□□□ -0.77
BRCA1-213ENST00000476777 PIAS1O75925 651 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 GBAP04062 536 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 S100BP04271 92 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-213ENST00000476777 PPP3CBP16298 524 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 EPB42P16452 691 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 TPD52P55327 224 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-213ENST00000476777 RPS4XP62701 263 aaKnown RBP10.23□□□□□ -0.77
BRCA1-213ENST00000476777 CUL3Q13618 768 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 FGFBP1Q14512 234 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 MORF4L2Q15014 288 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 PRICKLE4Q2TBC4 344 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 C6orf163Q5TEZ5 329 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 OR5M10Q6IEU7 315 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 FAM111BQ6SJ93 734 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 NUDT13Q86X67 352 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 ANKMY2Q8IV38 441 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 UBQLNLQ8IYU4 475 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 UBTD2Q8WUN7 234 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 REPS1Q96D71 796 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 ZBED6CLQ96FA7 236 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-213ENST00000476777 PLPPR2Q96GM1 343 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 UBXN10Q96LJ8 280 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 SMYD2Q9NRG4 433 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 OPTCQ9UBM4 332 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 DKKL1Q9UK85 242 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 PROCRQ9UNN8 238 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 CFL2Q9Y281 166 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 PCDHGA11Q9Y5H2 935 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 MALRD1Q5VYJ5 2156 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 TENM1Q9UKZ4 2725 aa10.23□□□□□ -0.77
BRCA1-213ENST00000476777 OR6C70A6NIJ9 312 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 A8MV72 311 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-213ENST00000476777 EFCAB8A8MWE9 144 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 H0YIV9 168 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 TO15178 435 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 TNFRSF21O75509 655 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 CBX7O95931 251 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 FAM157CP0CG43 387 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 PEPDP12955 493 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 PORP16435 677 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-213ENST00000476777 DRD5P21918 477 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 DPP4P27487 766 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 IDUAP35475 653 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 SUCLG1P53597 346 aaKnown RBP10.22□□□□□ -0.77
BRCA1-213ENST00000476777 MAP4K2Q12851 820 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 FASTKD3Q14CZ7 662 aaKnown RBP10.22□□□□□ -0.77
BRCA1-213ENST00000476777 EXOSC7Q15024 291 aaKnown RBP10.22□□□□□ -0.77
BRCA1-213ENST00000476777 EXOC3L2Q2M3D2 409 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 KRTAP24-1Q3LI83 254 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 LIPJQ5W064 366 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 DNM1P46Q6ZS02 220 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms