RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 MAD2L1Q13257 205 aaPredicted RBP9.38□□□□□ -0.91
CCM2-208ENST00000476594 TOMM20Q15388 145 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 LTB4RQ15722 352 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 VPS26BQ4G0F5 336 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 ATP6AP1LQ52LC2 224 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 TRMT12Q53H54 448 aaKnown RBP9.38□□□□□ -0.91
CCM2-208ENST00000476594 SH2D4BQ5SQS7 431 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 KANK2Q63ZY3 851 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 CLEC6AQ6EIG7 209 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 FAM71E1Q6IPT2 247 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 LRIG3Q6UXM1 1119 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 B3GNT6Q6ZMB0 384 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 NUDCD3Q8IVD9 361 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 PM20D2Q8IYS1 436 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 PRR22Q8IZ63 422 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 MMP21Q8N119 569 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 NATD1Q8N6N6 113 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 OR1J4Q8NGS1 313 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 TWIST2Q8WVJ9 160 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 SDCCAG3Q96C92 435 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 OMA1Q96E52 524 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 ZBED6CLQ96FA7 236 aaPredicted RBP9.38□□□□□ -0.91
CCM2-208ENST00000476594 ZNF764Q96H86 408 aaPredicted RBP9.38□□□□□ -0.91
CCM2-208ENST00000476594 TMEM41AQ96HV5 264 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 COL21A1Q96P44 957 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 BTBD9Q96Q07 612 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 DMRTA2Q96SC8 542 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 ANGPTL4Q9BY76 406 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 C12orf65Q9H3J6 166 aaKnown RBP9.38□□□□□ -0.91
CCM2-208ENST00000476594 CENPHQ9H3R5 247 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 SSU72Q9NP77 194 aaKnown RBP9.38□□□□□ -0.91
CCM2-208ENST00000476594 RAB21Q9UL25 225 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 TRAF6Q9Y4K3 522 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 GTF3C1Q12789 2109 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 PRAMEF25A6NGN4 478 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 OR6C70A6NIJ9 312 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 TRIM3O75382 744 aaPredicted RBP9.37□□□□□ -0.91
CCM2-208ENST00000476594 REM1O75628 298 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 TRAPPC6AO75865 159 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 JUNP05412 331 aaKnown RBP9.37□□□□□ -0.91
CCM2-208ENST00000476594 ABCB1P08183 1280 aaPredicted RBP9.37□□□□□ -0.91
CCM2-208ENST00000476594 ACVR2AP27037 513 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 HPCAL1P37235 193 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 EMDP50402 254 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 ADORA2A-AS1P86434 159 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 MGAT2Q10469 447 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 NNATQ16517 81 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 ZNF630Q2M218 657 aaPredicted RBP9.37□□□□□ -0.91
CCM2-208ENST00000476594 GALNTL6Q49A17 601 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 GXYLT1Q4G148 440 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 ARL13AQ5H913 290 aaPredicted RBP9.37□□□□□ -0.91
CCM2-208ENST00000476594 LCE2DQ5TA82 110 aaPredicted RBP9.37□□□□□ -0.91
CCM2-208ENST00000476594 SP5Q6BEB4 398 aaPredicted RBP9.37□□□□□ -0.91
CCM2-208ENST00000476594 FAM180BQ6P0A1 224 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 ZNF585AQ6P3V2 769 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 NEIL3Q8TAT5 605 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 KAT2AQ92830 837 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 PPCDCQ96CD2 204 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 MTERF3Q96E29 417 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 LRRC46Q96FV0 321 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 PRPF18Q99633 342 aaKnown RBP9.37□□□□□ -0.91
CCM2-208ENST00000476594 REEP4Q9H6H4 257 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 FOLH1BQ9HBA9 442 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 SLC24A3Q9HC58 644 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 Q9N2J8 555 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 ATAD3AQ9NVI7 634 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 SLC17A7Q9P2U7 560 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 MAPRE3Q9UPY8 281 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 GPR55Q9Y2T6 319 aaPredicted RBP9.37□□□□□ -0.91
CCM2-208ENST00000476594 DNAJC15Q9Y5T4 150 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 ACTL7BQ9Y614 415 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 NOTCH2Q04721 2471 aa9.37□□□□□ -0.91
CCM2-208ENST00000476594 UTP20O75691 2785 aaKnown RBP9.36□□□□□ -0.91
CCM2-208ENST00000476594 CROCCQ5TZA2 2017 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 C15orf38-AP3S2A0A0A6YYH1 394 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 LRRC3CA6NJW4 275 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 PLOD2O00469 737 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 PIP5K1BO14986 540 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 BIRC5O15392 142 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 TBX19O60806 448 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 LYPLA1O75608 230 aaPredicted RBP9.36□□□□□ -0.91
CCM2-208ENST00000476594 CBR3O75828 277 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 ZWINTO95229 277 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 KCNH1O95259 989 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 HSPA4LO95757 839 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 BPGMP07738 259 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 LINC00032P0C843 101 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 GRK2P25098 689 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 PNLIPRP2P54317 469 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 DECR1Q16698 335 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 CYP27C1Q4G0S4 372 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 CEP85LQ5SZL2 805 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 TIGD3Q6B0B8 471 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 ENPP6Q6UWR7 440 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 TMEM107Q6UX40 140 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 ANGPTL8Q6UXH0 198 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 TMEM64Q6YI46 380 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 C3P1Q6ZMU1 363 aa9.36□□□□□ -0.91
CCM2-208ENST00000476594 LARP4Q71RC2 724 aaKnown RBP eCLIP9.36□□□□□ -0.919e-6■■■■■ 29.6
CCM2-208ENST00000476594 FGD2Q7Z6J4 655 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms