RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 CCDC189A1A4V9 331 aa11.4□□□□□ -0.58
SKA3-206ENST00000475251 UBXN8O00124 270 aa11.4□□□□□ -0.58
SKA3-206ENST00000475251 PGRMC2O15173 223 aa11.4□□□□□ -0.58
SKA3-206ENST00000475251 TGM6O95932 706 aa11.4□□□□□ -0.58
SKA3-206ENST00000475251 PEPDP12955 493 aa11.4□□□□□ -0.58
SKA3-206ENST00000475251 SPRP35270 261 aaPredicted RBP11.4□□□□□ -0.58
SKA3-206ENST00000475251 PIK3CGP48736 1102 aa11.4□□□□□ -0.58
SKA3-206ENST00000475251 STARP49675 285 aa11.4□□□□□ -0.58
SKA3-206ENST00000475251 PSPHP78330 225 aa11.4□□□□□ -0.58
SKA3-206ENST00000475251 DMTNQ08495 405 aa11.4□□□□□ -0.58
SKA3-206ENST00000475251 FASTKD3Q14CZ7 662 aaKnown RBP11.4□□□□□ -0.58
SKA3-206ENST00000475251 NNATQ16517 81 aa11.4□□□□□ -0.58
SKA3-206ENST00000475251 CPSF6Q16630 551 aaKnown RBP eCLIP11.4□□□□□ -0.58
SKA3-206ENST00000475251 C10orf62Q5T681 223 aaPredicted RBP11.4□□□□□ -0.58
SKA3-206ENST00000475251 PODNL1Q6PEZ8 512 aa11.4□□□□□ -0.58
SKA3-206ENST00000475251 PAGE2Q7Z2X7 111 aa11.4□□□□□ -0.58
SKA3-206ENST00000475251 PYROXD1Q8WU10 500 aa11.4□□□□□ -0.58
SKA3-206ENST00000475251 ZNF845Q96IR2 970 aaPredicted RBP11.4□□□□□ -0.58
SKA3-206ENST00000475251 ATOH8Q96SQ7 321 aa11.4□□□□□ -0.58
SKA3-206ENST00000475251 LRRC1Q9BTT6 524 aa11.4□□□□□ -0.58
SKA3-206ENST00000475251 ITPAQ9BY32 194 aa11.4□□□□□ -0.58
SKA3-206ENST00000475251 FANCFQ9NPI8 374 aa11.4□□□□□ -0.58
SKA3-206ENST00000475251 SMYD2Q9NRG4 433 aa11.4□□□□□ -0.58
SKA3-206ENST00000475251 SNX12Q9UMY4 172 aa11.4□□□□□ -0.58
SKA3-206ENST00000475251 DTX4Q9Y2E6 619 aa11.4□□□□□ -0.58
SKA3-206ENST00000475251 WIF1Q9Y5W5 379 aa11.4□□□□□ -0.58
SKA3-206ENST00000475251 MED12LQ86YW9 2145 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 C1orf226A1L170 272 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 FRG2CA6NGY1 282 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 OR6C70A6NIJ9 312 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 RNF212BA8MTL3 300 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 EMC8O43402 210 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 DSCAMO60469 2012 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 UGT2B11O75310 529 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 ALDOAP04075 364 aaKnown RBP11.39□□□□□ -0.59
SKA3-206ENST00000475251 ATP1B1P05026 303 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 LTA4HP09960 611 aaKnown RBP11.39□□□□□ -0.59
SKA3-206ENST00000475251 CD8BP10966 210 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 PPP3CBP16298 524 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 TCP1P17987 556 aaKnown RBP11.39□□□□□ -0.59
SKA3-206ENST00000475251 CSNK2A2P19784 350 aaPredicted RBP11.39□□□□□ -0.59
SKA3-206ENST00000475251 DRD5P21918 477 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 CNTFP26441 200 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 DEKP35659 375 aaKnown RBP11.39□□□□□ -0.59
SKA3-206ENST00000475251 KRT20P35900 424 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 GMPRP36959 345 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 PPICP45877 212 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 NR1H2P55055 460 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 HMGCS1Q01581 520 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 MAP4K2Q12851 820 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 CHD3Q12873 2000 aaKnown RBP11.39□□□□□ -0.59
SKA3-206ENST00000475251 ETFDHQ16134 617 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 PRICKLE4Q2TBC4 344 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 BEX5Q5H9J7 111 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 HEPHL1Q6MZM0 1159 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 VWA1Q6PCB0 445 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 ZNF474Q6S9Z5 364 aaPredicted RBP11.39□□□□□ -0.59
SKA3-206ENST00000475251 PLXDC2Q6UX71 529 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 CYS1Q717R9 158 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 CCDC91Q7Z6B0 441 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 MILR1Q7Z6M3 343 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 GAS2L3Q86XJ1 694 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 ADCY4Q8NFM4 1077 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 RHEBL1Q8TAI7 183 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 WDR20Q8TBZ3 569 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 ZC3HAV1LQ96H79 300 aaKnown RBP11.39□□□□□ -0.59
SKA3-206ENST00000475251 COL21A1Q96P44 957 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 OPN3Q9H1Y3 402 aaPredicted RBP11.39□□□□□ -0.59
SKA3-206ENST00000475251 ZNF701Q9NV72 531 aaPredicted RBP11.39□□□□□ -0.59
SKA3-206ENST00000475251 ADAM29Q9UKF5 820 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 PSME2Q9UL46 239 aa11.39□□□□□ -0.59
SKA3-206ENST00000475251 TNPO3Q9Y5L0 923 aaKnown RBP11.39□□□□□ -0.59
SKA3-206ENST00000475251 RAI1Q7Z5J4 1906 aaPredicted RBP11.39□□□□□ -0.59
SKA3-206ENST00000475251 UQCRHLA0A096LP55 91 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 A0A1W2PS29 197 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 LRRC14BA6NHZ5 514 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 EFCAB8A8MWE9 144 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 LINC01387J3KSC0 135 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 TO15178 435 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 PIAS1O75925 651 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 GBAP04062 536 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 TP53P04637 393 aaPredicted RBP11.38□□□□□ -0.59
SKA3-206ENST00000475251 GFAPP14136 432 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 S1PR1P21453 382 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 TBXA2RP21731 343 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 DPP4P27487 766 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 CRABP2P29373 138 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 CCKARP32238 428 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 ALDH18A1P54886 795 aaKnown RBP11.38□□□□□ -0.59
SKA3-206ENST00000475251 ATP5J2P56134 94 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 MRPS22P82650 360 aaKnown RBP11.38□□□□□ -0.59
SKA3-206ENST00000475251 EFR3AQ14156 821 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 SLMAPQ14BN4 828 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 CCNYL2Q5T2Q4 361 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 GRTP1Q5TC63 336 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 HMBOX1Q6NT76 420 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 METTL2BQ6P1Q9 378 aaKnown RBP11.38□□□□□ -0.59
SKA3-206ENST00000475251 ZNF550Q7Z398 422 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 BTLAQ7Z6A9 289 aa11.38□□□□□ -0.59
SKA3-206ENST00000475251 KLHL7Q8IXQ5 586 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms