RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 AWAT2Q6E213 333 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 BLOC1S3Q6QNY0 202 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 DPY19L4Q7Z388 723 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 COMMD6Q7Z4G1 85 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 TRIM46Q7Z4K8 759 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 TMEM19Q96HH6 336 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 CCM2LQ9NUG4 571 aaPredicted RBP10.42□□□□□ -0.74
VAPB-204ENST00000475243 CUEDC1Q9NWM3 386 aaPredicted RBP10.42□□□□□ -0.74
VAPB-204ENST00000475243 COPZ2Q9P299 210 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 MAN2B1O00754 1011 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 FBP2O00757 339 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 H2AFB2P0C5Z0 115 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 PET100P0DJ07 73 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 NR4A2P43354 598 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 HYAL4Q2M3T9 481 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 DEFB133Q30KQ1 61 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 ZNF829Q3KNS6 432 aaPredicted RBP10.42□□□□□ -0.74
VAPB-204ENST00000475243 WDR53Q7Z5U6 358 aaPredicted RBP10.42□□□□□ -0.74
VAPB-204ENST00000475243 AIG1Q9NVV5 245 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 USP36Q9P275 1121 aaKnown RBP10.42□□□□□ -0.74
VAPB-204ENST00000475243 AGAP5A6NIR3 686 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 SGK494L7N484 410 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 PCDH17O14917 1159 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 GKN3PP0CG01 181 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 LAMP1P11279 417 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 ACTC1P68032 377 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 ACTA1P68133 377 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 TRAM1Q15629 374 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 COL28A1Q2UY09 1125 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 COMTD1Q86VU5 262 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 CREB3L1Q96BA8 519 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 SLC41A3Q96GZ6 507 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 OR52A4PA6NMU1 304 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 FAM189A1O60320 539 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 HRH2P25021 359 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 BMPR1AP36894 532 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 RABIFP47224 123 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 LIPIQ6XZB0 460 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 LRRTM3Q86VH5 581 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 LGALS12Q96DT0 336 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 VRTNQ9H8Y1 702 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 SH3BGRL2Q9UJC5 107 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 ADAM18Q9Y3Q7 739 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 FER1L6Q2WGJ9 1857 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 MSL3P1P0C860 447 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 PNMTP11086 282 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 Q6ZSR6 202 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 ACBD7Q8N6N7 88 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 IL17RCQ8NAC3 791 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 PEX13Q92968 403 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 DDIT4LQ96D03 193 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 METTL2AQ96IZ6 378 aaKnown RBP10.42□□□□□ -0.74
VAPB-204ENST00000475243 VDAC3Q9Y277 283 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 TMEM225BP0DP42 221 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 ZNF43P17038 809 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 CERS1P27544 350 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 THBS2P35442 1172 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 WNT7BP56706 349 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 CLDN8P56748 225 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 C6orf132Q5T0Z8 1188 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 KANK2Q63ZY3 851 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 OR52E8Q6IFG1 317 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 METTL2BQ6P1Q9 378 aaKnown RBP10.42□□□□□ -0.74
VAPB-204ENST00000475243 TMEM135Q86UB9 458 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 FTMTQ8N4E7 242 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 TRIB3Q96RU7 358 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 TUBA1CQ9BQE3 449 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 SLC39A1Q9NY26 324 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 MAB21L2Q9Y586 359 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 HMX3A6NHT5 357 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 LDB3O75112 727 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 SORBS2O94875 1100 aaKnown RBP10.41□□□□□ -0.74
VAPB-204ENST00000475243 UGT2B10P36537 528 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 FXYD4P59646 89 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 ACTA2P62736 377 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 ACTG2P63267 376 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 TLE3Q04726 772 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 HES5Q5TA89 166 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 SLC18B1Q6NT16 456 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 DCDC5Q6ZRR9 648 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 OR9Q2Q8NGE9 314 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 OR5D16Q8NGK9 328 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 OR9A2Q8NGT5 310 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 FUBP1Q96AE4 644 aaKnown RBP10.41□□□□□ -0.74
VAPB-204ENST00000475243 SAMD8Q96LT4 415 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 RANBP9Q96S59 729 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 PREBQ9HCU5 417 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 ANKMY1Q9P2S6 941 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 TMPRSS11EQ9UL52 423 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 UBE2J1Q9Y385 318 aaPredicted RBP10.41□□□□□ -0.74
VAPB-204ENST00000475243 SH3PXD2BA1X283 911 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 DRD2P14416 443 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 ZNF45Q02386 682 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 LETMD1Q6P1Q0 360 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 DUS1LQ6P1R4 473 aaKnown RBP10.41□□□□□ -0.74
VAPB-204ENST00000475243 NETO1Q8TDF5 533 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 OR4K3Q96R72 315 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 NXF5Q9H1B4 397 aaKnown RBP10.41□□□□□ -0.74
VAPB-204ENST00000475243 MMP27Q9H306 513 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 RNF215Q9Y6U7 377 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms