RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 TMEM182Q6ZP80 229 aaPredicted RBP5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 Q6ZPB1 254 aaPredicted RBP5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 DCUN1D3Q8IWE4 304 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 GPALPP1Q8IXQ4 340 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 RNF113BQ8IZP6 322 aaKnown RBP5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 FBXO39Q8N4B4 442 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 BEND2Q8NDZ0 799 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 TSPAN14Q8NG11 270 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 HM13Q8TCT9 377 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 FCGR1BQ92637 280 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 SLC22A12Q96S37 553 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 CDCA3Q99618 268 aaPredicted RBP5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 NIPSNAP1Q9BPW8 284 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 SPATA5L1Q9BVQ7 753 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 SCNM1Q9BWG6 230 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 CCDC90BQ9GZT6 254 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 ELOVL6Q9H5J4 265 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 ABCB9Q9NP78 766 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 IFT46Q9NQC8 304 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 OR2S2Q9NQN1 319 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 ACSS2Q9NR19 701 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 RDH8Q9NYR8 311 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 MLXQ9UH92 298 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 OPN4Q9UHM6 478 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 ANAPC7Q9UJX3 599 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 SORCS3Q9UPU3 1222 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 NEU2Q9Y3R4 380 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 RIPK3Q9Y572 518 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 PTGDR2Q9Y5Y4 395 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 IGF2RP11717 2491 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 MYO15AQ9UKN7 3530 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 PRSS38A1L453 326 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 PRR19A6NJB7 356 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 FAM90A7PA6NKC0 464 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 FAM171A2A8MVW0 826 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 FAM90A22PA8MWA6 464 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 FAM90A12PA8MX19 464 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 FAM90A23PA8MXZ1 464 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 SGK494L7N484 410 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 PAGE4O60829 102 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 RBMXL2O75526 392 aaKnown RBP5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 UBOX5O94941 541 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 SEC24AO95486 1093 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 IGHV2-70P01814 119 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 PPBPP02775 128 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 FTH1P02794 183 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 SMIM10L1P0DMW3 83 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 VSIG8P0DPA2 414 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 HLA-DMAP28067 261 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 HTR2AP28223 471 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 MMP12P39900 470 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 MAGEA3P43357 314 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 CAMPP49913 170 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 CNN1P51911 297 aaKnown RBP5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 EPHA5P54756 1037 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 RIPPLY1Q0D2K3 151 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 TARDBPQ13148 414 aaKnown RBP eCLIP5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 SERTAD2Q14140 314 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 PTGR1Q14914 329 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 ARL6IP1Q15041 203 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 EXT1Q16394 746 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 CNPY1Q3B7I2 92 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 TIGD2Q4W5G0 525 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 PAN3Q58A45 887 aaKnown RBP5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 TTC23Q5W5X9 447 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 ZNF562Q6V9R5 426 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 ESPNLQ6ZVH7 1005 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 C16orf62Q7Z3J2 963 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 ERASQ7Z444 233 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 NET1Q7Z628 596 aaPredicted RBP5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 SPAG16Q8N0X2 631 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 CERS5Q8N5B7 392 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 OR5D13Q8NGL4 314 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 AGAP11Q8TF27 550 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 SCARB1Q8WTV0 552 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 CA5BP1Q8WTZ4 195 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 EMG1Q92979 244 aaKnown RBP5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 FBXO17Q96EF6 278 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 STAMBPL1Q96FJ0 436 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 SMIM10Q96HG1 83 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 TECTBQ96PL2 329 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 NAPGQ99747 312 aaPredicted RBP5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 PCGF1Q9BSM1 259 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 NARFLQ9H6Q4 476 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 PLGRKTQ9HBL7 147 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 GP6Q9HCN6 339 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 CD209Q9NNX6 404 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 ALKBH4Q9NXW9 302 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 PLK2Q9NYY3 685 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 NAGPAQ9UK23 515 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 TP53TG5Q9Y2B4 290 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 TESMINQ9Y4I5 508 aa5.72□□□□□ -1.49
SMARCE1-208ENST00000474246 KALRNO60229 2985 aa5.71□□□□□ -1.49
SMARCE1-208ENST00000474246 EFCAB7A8K855 629 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 TEX22C9J3V5 150 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 EMC8O43402 210 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 CCDC22O60826 627 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 SERPIND1P05546 499 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 SYPP08247 313 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 RNH1P13489 461 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms