RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 MECRQ9BV79 373 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 STMN4Q9H169 189 aaPredicted RBP10.25□□□□□ -0.77
CKS1B-206ENST00000474215 TUBB1Q9H4B7 451 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 RUBCNLQ9H714 662 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 EXO5Q9H790 373 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 METTL7AQ9H8H3 244 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 LRTM1Q9HBL6 345 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 TAS2R9Q9NYW1 312 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 COQ3Q9NZJ6 369 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 SENP1Q9P0U3 644 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 TNFRSF10DQ9UBN6 386 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 FIS1Q9Y3D6 152 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 PTGDR2Q9Y5Y4 395 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 A0A087WV62 115 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 FIGNL2A6NMB9 653 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 TYROBPO43914 113 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 ICOSLGO75144 302 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 NME6O75414 186 aaPredicted RBP10.24□□□□□ -0.77
CKS1B-206ENST00000474215 REM1O75628 298 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 TRAPPC6AO75865 159 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 SLITRK5O94991 958 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 JUNP05412 331 aaKnown RBP10.24□□□□□ -0.77
CKS1B-206ENST00000474215 CHRNGP07510 517 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 HOXD4P09016 255 aaPredicted RBP10.24□□□□□ -0.77
CKS1B-206ENST00000474215 CT45A8P0DMV1 189 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 CT45A9P0DMV2 189 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 NEFHP12036 1026 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 TACR1P25103 407 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 GDF1P27539 372 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 SERPINB5P36952 375 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 MASP1P48740 699 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 TRPC1P48995 793 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 NCBP2P52298 156 aaKnown RBP eCLIP10.24□□□□□ -0.77
CKS1B-206ENST00000474215 CORO7P57737 925 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 PSPHP78330 225 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 ZNF844Q08AG5 666 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 PMPCAQ10713 525 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 SNTA1Q13424 505 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 KRT71Q3SY84 523 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 RFTN2Q52LD8 501 aaPredicted RBP10.24□□□□□ -0.77
CKS1B-206ENST00000474215 CT45A2Q5DJT8 189 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 WLSQ5T9L3 541 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 FNDC7Q5VTL7 733 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 TIGD3Q6B0B8 471 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 DESI1Q6ICB0 168 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 SLC30A6Q6NXT4 461 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 TMEM81Q6P7N7 255 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 ACAD11Q709F0 780 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 RPRMLQ8N4K4 120 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 OR2T11Q8NH01 316 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 NEIL3Q8TAT5 605 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 TMBIM1Q969X1 311 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 TMEM41AQ96HV5 264 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 VSTM2LQ96N03 204 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 AMDHD1Q96NU7 426 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 COL21A1Q96P44 957 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 CCT7Q99832 543 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 SPRR3Q9UBC9 169 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 RAB21Q9UL25 225 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 C15orf41Q9Y2V0 281 aa10.24□□□□□ -0.77
CKS1B-206ENST00000474215 OR6C70A6NIJ9 312 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 TMEM233B4DJY2 109 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 PLOD2O00469 737 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 LSM1O15116 133 aaKnown RBP10.23□□□□□ -0.77
CKS1B-206ENST00000474215 RGS16O15492 202 aaPredicted RBP10.23□□□□□ -0.77
CKS1B-206ENST00000474215 CTIFO43310 598 aaKnown RBP10.23□□□□□ -0.77
CKS1B-206ENST00000474215 WDR1O75083 606 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 UGT2B11O75310 529 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 ERN1O75460 977 aaKnown RBP10.23□□□□□ -0.77
CKS1B-206ENST00000474215 HPNP05981 417 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 TUBBP07437 444 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 BPGMP07738 259 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 ENDOUP21128 410 aaKnown RBP10.23□□□□□ -0.77
CKS1B-206ENST00000474215 ELAVL4P26378 380 aaKnown RBP10.23□□□□□ -0.77
CKS1B-206ENST00000474215 NTSP30990 170 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 CDK9P50750 372 aaKnown RBP10.23□□□□□ -0.77
CKS1B-206ENST00000474215 NUP107P57740 925 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 GTF3C1Q12789 2109 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 ZCCHC23Q6ZST2 131 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 SLC44A2Q8IWA5 706 aaPredicted RBP10.23□□□□□ -0.77
CKS1B-206ENST00000474215 DDIASQ8IXT1 998 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 LIX1Q8N485 282 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 OR6Y1Q8NGX8 325 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 LILRB4Q8NHJ6 448 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 TWIST2Q8WVJ9 160 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 ASB5Q8WWX0 329 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 TMCO6Q96DC7 493 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 ELP4Q96EB1 424 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 SLC35A4Q96G79 324 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 FCRL1Q96LA6 429 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 NODALQ96S42 347 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 TTYH2Q9BSA4 534 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 SLC6A15Q9H2J7 730 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 UBQLN3Q9H347 655 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 GLIPR2Q9H4G4 154 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 FOLH1BQ9HBA9 442 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 ALKBH4Q9NXW9 302 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 BAIAP2L1Q9UHR4 511 aa10.23□□□□□ -0.77
CKS1B-206ENST00000474215 C19orf53Q9UNZ5 99 aaPredicted RBP10.23□□□□□ -0.77
CKS1B-206ENST00000474215 RNF6Q9Y252 685 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms