RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 LDAHQ9H6V9 325 aa13.08□□□□□ -0.32
VAMP4-203ENST00000474047 METTL7AQ9H8H3 244 aa13.08□□□□□ -0.32
VAMP4-203ENST00000474047 FOLH1BQ9HBA9 442 aa13.08□□□□□ -0.32
VAMP4-203ENST00000474047 B4GALT7Q9UBV7 327 aa13.08□□□□□ -0.32
VAMP4-203ENST00000474047 GPR55Q9Y2T6 319 aaPredicted RBP13.08□□□□□ -0.32
VAMP4-203ENST00000474047 POLEQ07864 2286 aa13.07□□□□□ -0.32
VAMP4-203ENST00000474047 DOPEY2Q9Y3R5 2298 aa13.07□□□□□ -0.32
VAMP4-203ENST00000474047 A0A087WV62 115 aa13.07□□□□□ -0.32
VAMP4-203ENST00000474047 A0A1B0GTH9 108 aa13.07□□□□□ -0.32
VAMP4-203ENST00000474047 PPM1BO75688 479 aa13.07□□□□□ -0.32
VAMP4-203ENST00000474047 ABCB1P08183 1280 aaPredicted RBP13.07□□□□□ -0.32
VAMP4-203ENST00000474047 IL12BP29460 328 aa13.07□□□□□ -0.32
VAMP4-203ENST00000474047 PTGS2P35354 604 aa13.07□□□□□ -0.32
VAMP4-203ENST00000474047 CA7P43166 264 aa13.07□□□□□ -0.32
VAMP4-203ENST00000474047 SLC18A1P54219 525 aa13.07□□□□□ -0.32
VAMP4-203ENST00000474047 WDR4P57081 412 aaKnown RBP13.07□□□□□ -0.32
VAMP4-203ENST00000474047 BST1Q10588 318 aa13.07□□□□□ -0.32
VAMP4-203ENST00000474047 SLC10A1Q14973 349 aa13.07□□□□□ -0.32
VAMP4-203ENST00000474047 CMPK2Q5EBM0 449 aa13.07□□□□□ -0.32
VAMP4-203ENST00000474047 ZNF551Q7Z340 670 aaPredicted RBP13.07□□□□□ -0.32
VAMP4-203ENST00000474047 NUP54Q7Z3B4 507 aa13.07□□□□□ -0.32
VAMP4-203ENST00000474047 SZRD1Q7Z422 152 aa13.07□□□□□ -0.32
VAMP4-203ENST00000474047 SLC44A2Q8IWA5 706 aaPredicted RBP13.07□□□□□ -0.32
VAMP4-203ENST00000474047 FAM109AQ8N4B1 249 aa13.07□□□□□ -0.32
VAMP4-203ENST00000474047 SPPL2AQ8TCT8 520 aa13.07□□□□□ -0.32
VAMP4-203ENST00000474047 RELTQ969Z4 430 aa13.07□□□□□ -0.32
VAMP4-203ENST00000474047 ELP4Q96EB1 424 aa13.07□□□□□ -0.32
VAMP4-203ENST00000474047 SECISBP2Q96T21 854 aaKnown RBP13.07□□□□□ -0.32
VAMP4-203ENST00000474047 C20orf27Q9GZN8 174 aa13.07□□□□□ -0.32
VAMP4-203ENST00000474047 SH2D2AQ9NP31 389 aa13.07□□□□□ -0.32
VAMP4-203ENST00000474047 ZFP64Q9NPA5 681 aa13.07□□□□□ -0.32
VAMP4-203ENST00000474047 ATAD3AQ9NVI7 634 aa13.07□□□□□ -0.32
VAMP4-203ENST00000474047 NOP53Q9NZM5 478 aaKnown RBP13.07□□□□□ -0.32
VAMP4-203ENST00000474047 CNOT11Q9UKZ1 510 aaKnown RBP13.07□□□□□ -0.32
VAMP4-203ENST00000474047 C19orf53Q9UNZ5 99 aaPredicted RBP13.07□□□□□ -0.32
VAMP4-203ENST00000474047 HIVEP3Q5T1R4 2406 aa13.07□□□□□ -0.32
VAMP4-203ENST00000474047 PLOD2O00469 737 aa13.06□□□□□ -0.32
VAMP4-203ENST00000474047 TBX19O60806 448 aa13.06□□□□□ -0.32
VAMP4-203ENST00000474047 NME6O75414 186 aaPredicted RBP13.06□□□□□ -0.32
VAMP4-203ENST00000474047 SNX4O95219 450 aa13.06□□□□□ -0.32
VAMP4-203ENST00000474047 LDLRP01130 860 aa13.06□□□□□ -0.32
VAMP4-203ENST00000474047 SOX18P35713 384 aa13.06□□□□□ -0.32
VAMP4-203ENST00000474047 MAGEA5P43359 124 aa13.06□□□□□ -0.32
VAMP4-203ENST00000474047 CORO7P57737 925 aa13.06□□□□□ -0.32
VAMP4-203ENST00000474047 PSPHP78330 225 aa13.06□□□□□ -0.32
VAMP4-203ENST00000474047 C3AR1Q16581 482 aa13.06□□□□□ -0.32
VAMP4-203ENST00000474047 CPTPQ5TA50 214 aa13.06□□□□□ -0.32
VAMP4-203ENST00000474047 MTFR2Q6P444 385 aa13.06□□□□□ -0.32
VAMP4-203ENST00000474047 ARHGAP11AQ6P4F7 1023 aa13.06□□□□□ -0.32
VAMP4-203ENST00000474047 TMEM251Q8N6I4 163 aa13.06□□□□□ -0.32
VAMP4-203ENST00000474047 TMBIM1Q969X1 311 aa13.06□□□□□ -0.32
VAMP4-203ENST00000474047 TMCO6Q96DC7 493 aa13.06□□□□□ -0.32
VAMP4-203ENST00000474047 ZNF764Q96H86 408 aaPredicted RBP13.06□□□□□ -0.32
VAMP4-203ENST00000474047 ZNF597Q96LX8 424 aa13.06□□□□□ -0.32
VAMP4-203ENST00000474047 RILPQ96NA2 401 aa13.06□□□□□ -0.32
VAMP4-203ENST00000474047 BTBD9Q96Q07 612 aa13.06□□□□□ -0.32
VAMP4-203ENST00000474047 SORT1Q99523 831 aa13.06□□□□□ -0.32
VAMP4-203ENST00000474047 C3orf14Q9HBI5 128 aa13.06□□□□□ -0.32
VAMP4-203ENST00000474047 THAP1Q9NVV9 213 aa13.06□□□□□ -0.32
VAMP4-203ENST00000474047 TINAGQ9UJW2 476 aa13.06□□□□□ -0.32
VAMP4-203ENST00000474047 NINQ8N4C6 2090 aa13.06□□□□□ -0.32
VAMP4-203ENST00000474047 UNC79Q9P2D8 2635 aa13.06□□□□□ -0.32
VAMP4-203ENST00000474047 ANKRD33BA6NCL7 494 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 SCAMP2O15127 329 aaKnown RBP13.05□□□□□ -0.32
VAMP4-203ENST00000474047 ZNHIT1O43257 154 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 GLSO94925 669 aaPredicted RBP13.05□□□□□ -0.32
VAMP4-203ENST00000474047 TPOP07202 933 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 PRKAG1P54619 331 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 EMX2Q04743 252 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 FOXO1Q12778 655 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 PTGR1Q14914 329 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 TOMM20Q15388 145 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 ZNF385BQ569K4 471 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 EID3Q8N140 333 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 OR7A2PQ8NGA2 310 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 VSTM2LQ96N03 204 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 COL21A1Q96P44 957 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 NUF2Q9BZD4 464 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 MANSC1Q9H8J5 431 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 ACSS1Q9NUB1 689 aaPredicted RBP13.05□□□□□ -0.32
VAMP4-203ENST00000474047 PNPOQ9NVS9 261 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 KLRF1Q9NZS2 232 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 GTF3C1Q12789 2109 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 MYO7BQ6PIF6 2116 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 A1L4Q6 167 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 UPK1AO00322 258 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 TO15178 435 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 ABCB7O75027 752 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 TRAPPC6AO75865 159 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 CT45A8P0DMV1 189 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 CT45A9P0DMV2 189 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 G6PDP11413 515 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 EFNA1P20827 205 aaPredicted RBP13.05□□□□□ -0.32
VAMP4-203ENST00000474047 PRPS1L1P21108 318 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 GDF1P27539 372 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 CASP3P42574 277 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 MRPS22P82650 360 aaKnown RBP13.05□□□□□ -0.32
VAMP4-203ENST00000474047 PDE7AQ13946 482 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 SMU1Q2TAY7 513 aa13.05□□□□□ -0.32
VAMP4-203ENST00000474047 CT45A2Q5DJT8 189 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms