RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 HSPBAP1Q96EW2 488 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 MAGED4Q96JG8 741 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 SH3GL2Q99962 352 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 NUF2Q9BZD4 464 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 DEFB127Q9H1M4 99 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 AKTIPQ9H8T0 292 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 IL1RL2Q9HB29 575 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 PLSCR2Q9NRY7 297 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 CNIH4Q9P003 139 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 ATP6V1HQ9UI12 483 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 C19orf53Q9UNZ5 99 aaPredicted RBP17.39■□□□□ 0.37
PTCD3-210ENST00000473829 ZNF835Q9Y2P0 537 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 LIPGQ9Y5X9 500 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.39■□□□□ 0.37
PTCD3-210ENST00000473829 UTP20O75691 2785 aaKnown RBP17.39■□□□□ 0.37
PTCD3-210ENST00000473829 ZNF407Q9C0G0 2248 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 USP9YO00507 2555 aaPredicted RBP17.38■□□□□ 0.37
PTCD3-210ENST00000473829 CAPN14A8MX76 684 aa17.38■□□□□ 0.37
PTCD3-210ENST00000473829 CDC40O60508 579 aaKnown RBP eCLIP17.38■□□□□ 0.37
PTCD3-210ENST00000473829 SLITRK5O94991 958 aa17.38■□□□□ 0.37
PTCD3-210ENST00000473829 CELA3AP09093 270 aa17.38■□□□□ 0.37
PTCD3-210ENST00000473829 G6PDP11413 515 aa17.38■□□□□ 0.37
PTCD3-210ENST00000473829 PRPS2P11908 318 aa17.38■□□□□ 0.37
PTCD3-210ENST00000473829 HPCAL1P37235 193 aa17.38■□□□□ 0.37
PTCD3-210ENST00000473829 MAGEA5P43359 124 aa17.38■□□□□ 0.37
PTCD3-210ENST00000473829 TMED10P49755 219 aaKnown RBP17.38■□□□□ 0.37
PTCD3-210ENST00000473829 DCAF7P61962 342 aa17.38■□□□□ 0.37
PTCD3-210ENST00000473829 KCNJ2P63252 427 aa17.38■□□□□ 0.37
PTCD3-210ENST00000473829 ZNF155Q12901 538 aaPredicted RBP17.38■□□□□ 0.37
PTCD3-210ENST00000473829 BNC2Q6ZN30 1099 aaPredicted RBP17.38■□□□□ 0.37
PTCD3-210ENST00000473829 WDR53Q7Z5U6 358 aaPredicted RBP17.38■□□□□ 0.37
PTCD3-210ENST00000473829 FJX1Q86VR8 437 aa17.38■□□□□ 0.37
PTCD3-210ENST00000473829 DIO2Q92813 273 aa17.38■□□□□ 0.37
PTCD3-210ENST00000473829 TMBIM1Q969X1 311 aa17.38■□□□□ 0.37
PTCD3-210ENST00000473829 MTERF3Q96E29 417 aa17.38■□□□□ 0.37
PTCD3-210ENST00000473829 ATP6V1G3Q96LB4 118 aa17.38■□□□□ 0.37
PTCD3-210ENST00000473829 NODALQ96S42 347 aa17.38■□□□□ 0.37
PTCD3-210ENST00000473829 ZDHHC11Q9H8X9 412 aa17.38■□□□□ 0.37
PTCD3-210ENST00000473829 DDX18Q9NVP1 670 aaKnown RBP17.38■□□□□ 0.37
PTCD3-210ENST00000473829 TAS2R9Q9NYW1 312 aa17.38■□□□□ 0.37
PTCD3-210ENST00000473829 SH3BGRL2Q9UJC5 107 aa17.38■□□□□ 0.37
PTCD3-210ENST00000473829 TINAGQ9UJW2 476 aa17.38■□□□□ 0.37
PTCD3-210ENST00000473829 GTF3C1Q12789 2109 aa17.38■□□□□ 0.37
PTCD3-210ENST00000473829 SPTAN1Q13813 2472 aaKnown RBP17.37■□□□□ 0.37
PTCD3-210ENST00000473829 DOPEY1Q5JWR5 2465 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 TRGV8A0A0C4DH27 118 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 A0A1B0GTH9 108 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 WIPF3A6NGB9 483 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 TP53I11O14683 189 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 COQ9O75208 318 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 UGT2B11O75310 529 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 PDE9AO76083 593 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 RFPL3SP0C7P2 107 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 LAMP1P11279 417 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 NAGAP17050 411 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 CA7P43166 264 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 DIO3P55073 304 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 PSG6Q00889 435 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 OCRLQ01968 901 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 EMX2Q04743 252 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 RBPJQ06330 500 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 C3AR1Q16581 482 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 HYAL4Q2M3T9 481 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 Q6ZPB1 254 aaPredicted RBP17.37■□□□□ 0.37
PTCD3-210ENST00000473829 HDXQ7Z353 690 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 SLC22A16Q86VW1 577 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 RIMKLAQ8IXN7 391 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 SLC34A3Q8N130 599 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 OR4N2Q8NGD1 307 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 RELTQ969Z4 430 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 NTNG2Q96CW9 530 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 ZBED6CLQ96FA7 236 aaPredicted RBP17.37■□□□□ 0.37
PTCD3-210ENST00000473829 RILPQ96NA2 401 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 PSMG3-AS1Q96PY0 264 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 DOHHQ9BU89 302 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 ZNF703Q9H7S9 590 aaPredicted RBP17.37■□□□□ 0.37
PTCD3-210ENST00000473829 THAP1Q9NVV9 213 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 ARGLU1Q9NWB6 273 aaPredicted RBP17.37■□□□□ 0.37
PTCD3-210ENST00000473829 ASIC5Q9NY37 505 aa17.37■□□□□ 0.37
PTCD3-210ENST00000473829 NOP53Q9NZM5 478 aaKnown RBP17.37■□□□□ 0.37
PTCD3-210ENST00000473829 MARCOQ9UEW3 520 aaPredicted RBP17.37■□□□□ 0.37
PTCD3-210ENST00000473829 FLNBO75369 2602 aaKnown RBP17.37■□□□□ 0.37
PTCD3-210ENST00000473829 DIDO1Q9BTC0 2240 aaKnown RBP17.37■□□□□ 0.37
PTCD3-210ENST00000473829 ANKRD33BA6NCL7 494 aa17.36■□□□□ 0.37
PTCD3-210ENST00000473829 ACOT7O00154 380 aa17.36■□□□□ 0.37
PTCD3-210ENST00000473829 TRIM3O75382 744 aaPredicted RBP17.36■□□□□ 0.37
PTCD3-210ENST00000473829 IFI6P09912 130 aa17.36■□□□□ 0.37
PTCD3-210ENST00000473829 CASP3P42574 277 aa17.36■□□□□ 0.37
PTCD3-210ENST00000473829 SMU1Q2TAY7 513 aa17.36■□□□□ 0.37
PTCD3-210ENST00000473829 FNDC7Q5VTL7 733 aa17.36■□□□□ 0.37
PTCD3-210ENST00000473829 RGS9BPQ6ZS82 235 aa17.36■□□□□ 0.37
PTCD3-210ENST00000473829 R3HCC1LQ7Z5L2 792 aaKnown RBP17.36■□□□□ 0.37
PTCD3-210ENST00000473829 SPPL2CQ8IUH8 684 aa17.36■□□□□ 0.37
PTCD3-210ENST00000473829 SLC44A2Q8IWA5 706 aaPredicted RBP17.36■□□□□ 0.37
PTCD3-210ENST00000473829 FAM109AQ8N4B1 249 aa17.36■□□□□ 0.37
PTCD3-210ENST00000473829 ZFP28Q8NHY6 868 aa17.36■□□□□ 0.37
PTCD3-210ENST00000473829 RAB3IL1Q8TBN0 382 aa17.36■□□□□ 0.37
PTCD3-210ENST00000473829 SECISBP2Q96T21 854 aaKnown RBP17.36■□□□□ 0.37
PTCD3-210ENST00000473829 ANGPTL4Q9BY76 406 aa17.36■□□□□ 0.37
PTCD3-210ENST00000473829 MANSC1Q9H8J5 431 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms