RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 LGI1O95970 557 aa10.3□□□□□ -0.76
C9orf3-214ENST00000473778 APOA1P02647 267 aa10.3□□□□□ -0.76
C9orf3-214ENST00000473778 HMGN2P05204 90 aaKnown RBP10.3□□□□□ -0.76
C9orf3-214ENST00000473778 RB1P06400 928 aa10.3□□□□□ -0.76
C9orf3-214ENST00000473778 CSF3P09919 207 aa10.3□□□□□ -0.76
C9orf3-214ENST00000473778 C8orf89P0DMQ9 161 aa10.3□□□□□ -0.76
C9orf3-214ENST00000473778 GSTM5P46439 218 aa10.3□□□□□ -0.76
C9orf3-214ENST00000473778 CLCNKAP51800 687 aa10.3□□□□□ -0.76
C9orf3-214ENST00000473778 HOXC5Q00444 222 aa10.3□□□□□ -0.76
C9orf3-214ENST00000473778 ALDH6A1Q02252 535 aaKnown RBP10.3□□□□□ -0.76
C9orf3-214ENST00000473778 CEP78Q5JTW2 689 aa10.3□□□□□ -0.76
C9orf3-214ENST00000473778 OR4C11Q6IEV9 310 aa10.3□□□□□ -0.76
C9orf3-214ENST00000473778 CD300LDQ6UXZ3 194 aa10.3□□□□□ -0.76
C9orf3-214ENST00000473778 ZNF517Q6ZMY9 492 aaPredicted RBP10.3□□□□□ -0.76
C9orf3-214ENST00000473778 GDPGP1Q6ZNW5 385 aa10.3□□□□□ -0.76
C9orf3-214ENST00000473778 OR8D1Q8WZ84 308 aa10.3□□□□□ -0.76
C9orf3-214ENST00000473778 SLC9A6Q92581 669 aa10.3□□□□□ -0.76
C9orf3-214ENST00000473778 TMCO6Q96DC7 493 aa10.3□□□□□ -0.76
C9orf3-214ENST00000473778 DMRTB1Q96MA1 342 aa10.3□□□□□ -0.76
C9orf3-214ENST00000473778 FNDC11Q9BVV2 318 aa10.3□□□□□ -0.76
C9orf3-214ENST00000473778 OR2B2Q9GZK3 357 aa10.3□□□□□ -0.76
C9orf3-214ENST00000473778 TMEM245Q9H330 911 aa10.3□□□□□ -0.76
C9orf3-214ENST00000473778 MBNL1Q9NR56 388 aaKnown RBP10.3□□□□□ -0.76
C9orf3-214ENST00000473778 ACSS1Q9NUB1 689 aaPredicted RBP10.3□□□□□ -0.76
C9orf3-214ENST00000473778 CNIH4Q9P003 139 aa10.3□□□□□ -0.76
C9orf3-214ENST00000473778 NTNG1Q9Y2I2 539 aa10.3□□□□□ -0.76
C9orf3-214ENST00000473778 CMAHPQ9Y471 501 aa10.3□□□□□ -0.76
C9orf3-214ENST00000473778 OR1A2Q9Y585 309 aa10.3□□□□□ -0.76
C9orf3-214ENST00000473778 SHISA3A0PJX4 238 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 IGLON5A6NGN9 336 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 MAN2B1O00754 1011 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 ZIC2O95409 532 aaPredicted RBP10.29□□□□□ -0.76
C9orf3-214ENST00000473778 RAB36O95755 333 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 PTNP21246 168 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 GPC1P35052 558 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 NCBP2P52298 156 aaKnown RBP eCLIP10.29□□□□□ -0.76
C9orf3-214ENST00000473778 P2RX3P56373 397 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 RACK1P63244 317 aaKnown RBP10.29□□□□□ -0.76
C9orf3-214ENST00000473778 HTRA4P83105 476 aaPredicted RBP10.29□□□□□ -0.76
C9orf3-214ENST00000473778 BNC1Q01954 994 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 WSCD2Q2TBF2 565 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 SLC25A30Q5SVS4 291 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 FAM92BQ6ZTR7 304 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 KRT73Q86Y46 540 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 FAM181AQ8N9Y4 354 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 IL17RCQ8NAC3 791 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 ZNF485Q8NCK3 441 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 OR2A1Q8NGT9 310 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 ANGPTL6Q8NI99 470 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 POF1BQ8WVV4 589 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 RGMAQ96B86 450 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 ZNF707Q96C28 371 aaPredicted RBP10.29□□□□□ -0.76
C9orf3-214ENST00000473778 PPP1R16AQ96I34 528 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 MSLNLQ96KJ4 702 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 KATNB1Q9BVA0 655 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 C11orf54Q9H0W9 315 aaPredicted RBP10.29□□□□□ -0.76
C9orf3-214ENST00000473778 SLC35C2Q9NQQ7 365 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 TAS2R7Q9NYW3 318 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 SSR3Q9UNL2 185 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 ATG4BQ9Y4P1 393 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 PCDHGB2Q9Y5G2 931 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 EDDM13A0A1B0GTR0 161 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 A0A1W2PR48 441 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 DVL2O14641 736 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 NARSO43776 548 aaKnown RBP10.29□□□□□ -0.76
C9orf3-214ENST00000473778 ERAL1O75616 437 aaKnown RBP10.29□□□□□ -0.76
C9orf3-214ENST00000473778 TIMP1P01033 207 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 LIMS3P0CW19 117 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 LIMS4P0CW20 117 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 TRHRP34981 398 aaPredicted RBP10.29□□□□□ -0.76
C9orf3-214ENST00000473778 BCL6P41182 706 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 BUD31P41223 144 aaPredicted RBP10.29□□□□□ -0.76
C9orf3-214ENST00000473778 IL12RB1P42701 662 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 SSR2P43308 183 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 TAS2R38P59533 333 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 FABP5Q01469 135 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 KRR1Q13601 381 aaKnown RBP10.29□□□□□ -0.76
C9orf3-214ENST00000473778 ARHGAP19Q14CB8 494 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 MLC1Q15049 377 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 SNAPC1Q16533 368 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.29□□□□□ -0.76
C9orf3-214ENST00000473778 TMEM52BQ4KMG9 183 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 ENTPD8Q5MY95 495 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 CLEC12AQ5QGZ9 265 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 ARMC4Q5T2S8 1044 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 C1orf53Q5VUE5 145 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 C18orf63Q68DL7 685 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 PRICKLE2Q7Z3G6 844 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 ADCK2Q7Z695 626 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 CCDC116Q8IYX3 515 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 ASCC1Q8N9N2 400 aaKnown RBP10.29□□□□□ -0.76
C9orf3-214ENST00000473778 OR8K5Q8NH50 307 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 OR52P1PQ8NH57 321 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 SETD6Q8TBK2 473 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 C6orf106Q9H6K1 298 aaPredicted RBP10.29□□□□□ -0.76
C9orf3-214ENST00000473778 PLSCR3Q9NRY6 295 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 ZNF221Q9UK13 617 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 PLEKHM1Q9Y4G2 1056 aa10.29□□□□□ -0.76
C9orf3-214ENST00000473778 MEIOCA2RUB1 952 aa10.28□□□□□ -0.76
C9orf3-214ENST00000473778 CDK2AP1O14519 115 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms