RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 THBDP07204 575 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 PTX3P26022 381 aaPredicted RBP12.55□□□□□ -0.4
SMURF1-203ENST00000472627 DPP4P27487 766 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 KRT20P35900 424 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 CASP9P55211 416 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 CTBP2P56545 445 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 ATP6V0D1P61421 351 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 PSPHP78330 225 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 HMGCS1Q01581 520 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 NRF1Q16656 503 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 PRAMEF9Q5VWM5 478 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 LIPNQ5VXI9 398 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 RAET1LQ5VY80 246 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 CCDC137Q6PK04 289 aaKnown RBP12.55□□□□□ -0.4
SMURF1-203ENST00000472627 MYLK4Q86YV6 388 aaPredicted RBP12.55□□□□□ -0.4
SMURF1-203ENST00000472627 PDPRQ8NCN5 879 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 ADCY4Q8NFM4 1077 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 OR4K17Q8NGC6 315 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 OR4K14Q8NGD5 310 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 OR6K3Q8NGY3 331 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 HUS1BQ8NHY5 278 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 SMAP2Q8WU79 429 aaPredicted RBP12.55□□□□□ -0.4
SMURF1-203ENST00000472627 FIG4Q92562 907 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 TSPAN17Q96FV3 270 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 CFAP36Q96G28 342 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 COL21A1Q96P44 957 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 NAP1L3Q99457 506 aaPredicted RBP12.55□□□□□ -0.4
SMURF1-203ENST00000472627 ACTR6Q9GZN1 396 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 ESRP2Q9H6T0 727 aaKnown RBP12.55□□□□□ -0.4
SMURF1-203ENST00000472627 FAIMQ9NVQ4 179 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 NSMCE4AQ9NXX6 385 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 STOML1Q9UBI4 398 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 HEY2Q9UBP5 337 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 PRODH2Q9UF12 536 aa12.55□□□□□ -0.4
SMURF1-203ENST00000472627 MED12Q93074 2177 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 A0A1W2PR48 441 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 GOLGA6L10A6NI86 522 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 OR6C70A6NIJ9 312 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 UBFD1O14562 309 aaKnown RBP12.54□□□□□ -0.4
SMURF1-203ENST00000472627 CLOCKO15516 846 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 SEC14L5O43304 696 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 WIPF1O43516 503 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 UGT2B11O75310 529 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 CD3EP07766 207 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 SRD5A1P18405 259 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 TCEA1P23193 301 aaKnown RBP12.54□□□□□ -0.4
SMURF1-203ENST00000472627 CDKN1AP38936 164 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 PTGDSP41222 190 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 DSCR4P56555 118 aaPredicted RBP12.54□□□□□ -0.4
SMURF1-203ENST00000472627 DSCR9P59020 149 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 TAS2R39P59534 338 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 MRPS22P82650 360 aaKnown RBP12.54□□□□□ -0.4
SMURF1-203ENST00000472627 EFR3AQ14156 821 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 E2F2Q14209 437 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 SLMAPQ14BN4 828 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 PON3Q15166 354 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 PPP1R7Q15435 360 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 SGCBQ16585 318 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 FBXO48Q5FWF7 155 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 TTC27Q6P3X3 843 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 BEND4Q6ZU67 534 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 ZC3HC1Q86WB0 502 aaKnown RBP12.54□□□□□ -0.4
SMURF1-203ENST00000472627 PDIK1LQ8N165 341 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 FNDC9Q8TBE3 224 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 ANKRD49Q8WVL7 239 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 ESAMQ96AP7 390 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 ITPAQ9BY32 194 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 PRRG4Q9BZD6 226 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 CD244Q9BZW8 370 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 BRINP2Q9C0B6 783 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 DDX31Q9H8H2 851 aaKnown RBP12.54□□□□□ -0.4
SMURF1-203ENST00000472627 EHD3Q9NZN3 535 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 FBXL2Q9UKC9 423 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 GPR52Q9Y2T5 361 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 ASB4Q9Y574 426 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 PCDHGA11Q9Y5H2 935 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 CR1P17927 2039 aa12.54□□□□□ -0.4
SMURF1-203ENST00000472627 EXPH5Q8NEV8 1989 aa12.53□□□□□ -0.4
SMURF1-203ENST00000472627 A0A0A6YYD5 115 aa12.53□□□□□ -0.4
SMURF1-203ENST00000472627 IGHV4-39P01824 125 aa12.53□□□□□ -0.4
SMURF1-203ENST00000472627 CPMP14384 443 aa12.53□□□□□ -0.4
SMURF1-203ENST00000472627 PORP16435 677 aaPredicted RBP12.53□□□□□ -0.4
SMURF1-203ENST00000472627 CXCR5P32302 372 aa12.53□□□□□ -0.4
SMURF1-203ENST00000472627 XKP51811 444 aa12.53□□□□□ -0.4
SMURF1-203ENST00000472627 ZNF75DP51815 510 aa12.53□□□□□ -0.4
SMURF1-203ENST00000472627 MGAT5Q09328 741 aa12.53□□□□□ -0.4
SMURF1-203ENST00000472627 GANABQ14697 944 aaKnown RBP12.53□□□□□ -0.4
SMURF1-203ENST00000472627 TMEM249Q2WGJ8 235 aa12.53□□□□□ -0.4
SMURF1-203ENST00000472627 RNASEH2BQ5TBB1 312 aaKnown RBP12.53□□□□□ -0.4
SMURF1-203ENST00000472627 MRM1Q6IN84 353 aaKnown RBP12.53□□□□□ -0.4
SMURF1-203ENST00000472627 GRHL2Q6ISB3 625 aa12.53□□□□□ -0.4
SMURF1-203ENST00000472627 PPP4R4Q6NUP7 873 aa12.53□□□□□ -0.4
SMURF1-203ENST00000472627 CLEC2AQ6UVW9 174 aa12.53□□□□□ -0.4
SMURF1-203ENST00000472627 STAC2Q6ZMT1 411 aa12.53□□□□□ -0.4
SMURF1-203ENST00000472627 C22orf34Q6ZV56 151 aa12.53□□□□□ -0.4
SMURF1-203ENST00000472627 STEAP2Q8NFT2 490 aa12.53□□□□□ -0.4
SMURF1-203ENST00000472627 ROBO4Q8WZ75 1007 aa12.53□□□□□ -0.4
SMURF1-203ENST00000472627 MTERF1Q99551 399 aaKnown RBP12.53□□□□□ -0.4
SMURF1-203ENST00000472627 LRRC1Q9BTT6 524 aa12.53□□□□□ -0.4
SMURF1-203ENST00000472627 NTMT1Q9BV86 223 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms