RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 VAC14Q08AM6 782 aa9.15□□□□□ -0.94
SF3A1-207ENST00000471342 LASP1Q14847 261 aaKnown RBP9.15□□□□□ -0.94
SF3A1-207ENST00000471342 ZNF468Q5VIY5 522 aaPredicted RBP9.15□□□□□ -0.94
SF3A1-207ENST00000471342 APOOLQ6UXV4 268 aa9.15□□□□□ -0.94
SF3A1-207ENST00000471342 NDUFAF7Q7L592 441 aa9.15□□□□□ -0.94
SF3A1-207ENST00000471342 SPACA3Q8IXA5 215 aa9.15□□□□□ -0.94
SF3A1-207ENST00000471342 ANKFN1Q8N957 763 aa9.15□□□□□ -0.94
SF3A1-207ENST00000471342 OR7G1Q8NGA0 311 aa9.15□□□□□ -0.94
SF3A1-207ENST00000471342 OR8K3Q8NH51 312 aa9.15□□□□□ -0.94
SF3A1-207ENST00000471342 OR10A6Q8NH74 314 aa9.15□□□□□ -0.94
SF3A1-207ENST00000471342 OR14A16Q8NHC5 309 aa9.15□□□□□ -0.94
SF3A1-207ENST00000471342 M1APQ8TC57 530 aa9.15□□□□□ -0.94
SF3A1-207ENST00000471342 SLC38A5Q8WUX1 472 aa9.15□□□□□ -0.94
SF3A1-207ENST00000471342 APOBEC4Q8WW27 367 aaKnown RBP9.15□□□□□ -0.94
SF3A1-207ENST00000471342 OR7D2Q96RA2 312 aa9.15□□□□□ -0.94
SF3A1-207ENST00000471342 CDRT15Q96T59 188 aa9.15□□□□□ -0.94
SF3A1-207ENST00000471342 PELOQ9BRX2 385 aaKnown RBP9.15□□□□□ -0.94
SF3A1-207ENST00000471342 YIPF4Q9BSR8 244 aa9.15□□□□□ -0.94
SF3A1-207ENST00000471342 WWTR1Q9GZV5 400 aa9.15□□□□□ -0.94
SF3A1-207ENST00000471342 SLC38A1Q9H2H9 487 aa9.15□□□□□ -0.94
SF3A1-207ENST00000471342 OR51I1Q9H343 314 aa9.15□□□□□ -0.94
SF3A1-207ENST00000471342 RMND5AQ9H871 391 aa9.15□□□□□ -0.94
SF3A1-207ENST00000471342 PROK2Q9HC23 129 aa9.15□□□□□ -0.94
SF3A1-207ENST00000471342 ZNF160Q9HCG1 818 aa9.15□□□□□ -0.94
SF3A1-207ENST00000471342 ZCCHC3Q9NUD5 404 aaKnown RBP9.15□□□□□ -0.94
SF3A1-207ENST00000471342 VPS4AQ9UN37 437 aa9.15□□□□□ -0.94
SF3A1-207ENST00000471342 A0A087WV48 116 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 TCRBV5S2A0A599 114 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 C17orf51A8MQB3 221 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 PCDH17O14917 1159 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 DNAJA2O60884 412 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 CEACAM4O75871 244 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 GUSBP08236 651 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 KRT16P08779 473 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 CD63P08962 238 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 OR12D1P0DN82 309 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 ARAFP10398 606 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 FUT4P22083 530 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 PTGDSP41222 190 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 PPICP45877 212 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 PGDP52209 483 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 EEFSECP57772 596 aaKnown RBP9.14□□□□□ -0.95
SF3A1-207ENST00000471342 RPS15P62841 145 aaKnown RBP9.14□□□□□ -0.95
SF3A1-207ENST00000471342 TLE3Q04726 772 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 LIPEQ05469 1076 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 MAPK14Q16539 360 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 SYPL1Q16563 259 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 DCAF10Q5QP82 559 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 FNDC7Q5VTL7 733 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 TNFAIP8L2Q6P589 184 aaPredicted RBP9.14□□□□□ -0.95
SF3A1-207ENST00000471342 ERMP1Q7Z2K6 904 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 SERPINA11Q86U17 422 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 PTRH1Q86Y79 214 aaKnown RBP9.14□□□□□ -0.95
SF3A1-207ENST00000471342 HPS6Q86YV9 775 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 RNF148Q8N7C7 305 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 C17orf47Q8NEP4 570 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 OR56A1Q8NGH5 318 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 NUBPLQ8TB37 319 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 FBXO30Q8TB52 745 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 WDR60Q8WVS4 1066 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 PIK3R3Q92569 461 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 DAZLQ92904 295 aaKnown RBP9.14□□□□□ -0.95
SF3A1-207ENST00000471342 HGDQ93099 445 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 MAGED4Q96JG8 741 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 SDF2Q99470 211 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 TUBB6Q9BUF5 446 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 ACTRT3Q9BYD9 372 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 OR8D2Q9GZM6 311 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 PCDHAC1Q9H158 963 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 PIGUQ9H490 435 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 TMEM38AQ9H6F2 299 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 GPN2Q9H9Y4 310 aaPredicted RBP9.14□□□□□ -0.95
SF3A1-207ENST00000471342 ZBTB20Q9HC78 741 aaPredicted RBP9.14□□□□□ -0.95
SF3A1-207ENST00000471342 A4GALTQ9NPC4 353 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 DUSP22Q9NRW4 184 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 SLC7A8Q9UHI5 535 aa9.14□□□□□ -0.95
SF3A1-207ENST00000471342 GPN3Q9UHW5 284 aaPredicted RBP9.14□□□□□ -0.95
SF3A1-207ENST00000471342 MED13Q9UHV7 2174 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 A8MVJ9 347 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 FAM220BPB1ANY3 271 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 ASNA1O43681 348 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 OR10H2O60403 315 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 ADAM11O75078 769 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 SEMA7AO75326 666 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 PDE5AO76074 875 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 KCNK2O95069 426 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 WISP1O95388 367 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 IGHEP01854 428 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 IFNA16P05015 189 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 MATN1P21941 496 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 RPS4Y1P22090 263 aaKnown RBP9.13□□□□□ -0.95
SF3A1-207ENST00000471342 HTR1EP28566 365 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 OTX2P32243 289 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 MAGEA8P43361 318 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 ST13P50502 369 aaKnown RBP9.13□□□□□ -0.95
SF3A1-207ENST00000471342 PRKAG1P54619 331 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 GAS1P54826 345 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 MLF1P58340 268 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 ZNF791Q3KP31 576 aaPredicted RBP9.13□□□□□ -0.95
SF3A1-207ENST00000471342 MFSD4BQ5TF39 518 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms