RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 PRCCQ92733 491 aaPredicted RBP4.8□□□□□ -1.64
RBM39-227ENST00000470563 MCUR1Q96AQ8 359 aa4.8□□□□□ -1.64
RBM39-227ENST00000470563 TMEM186Q96B77 213 aa4.8□□□□□ -1.64
RBM39-227ENST00000470563 RBM41Q96IZ5 413 aaKnown RBP4.8□□□□□ -1.64
RBM39-227ENST00000470563 DOCK7Q96N67 2140 aa4.8□□□□□ -1.64
RBM39-227ENST00000470563 FGFBP2Q9BYJ0 223 aa4.8□□□□□ -1.64
RBM39-227ENST00000470563 C1orf21Q9H246 121 aa4.8□□□□□ -1.64
RBM39-227ENST00000470563 GOLPH3Q9H4A6 298 aa4.8□□□□□ -1.64
RBM39-227ENST00000470563 MRPL47Q9HD33 250 aaKnown RBP4.8□□□□□ -1.64
RBM39-227ENST00000470563 AGPAT3Q9NRZ7 376 aa4.8□□□□□ -1.64
RBM39-227ENST00000470563 PTTG2Q9NZH5 202 aa4.8□□□□□ -1.64
RBM39-227ENST00000470563 OR6C2Q9NZP2 312 aa4.8□□□□□ -1.64
RBM39-227ENST00000470563 TAAR2Q9P1P5 351 aa4.8□□□□□ -1.64
RBM39-227ENST00000470563 ZNF624Q9P2J8 865 aaPredicted RBP4.8□□□□□ -1.64
RBM39-227ENST00000470563 THEGQ9P2T0 379 aa4.8□□□□□ -1.64
RBM39-227ENST00000470563 ATXN10Q9UBB4 475 aa4.8□□□□□ -1.64
RBM39-227ENST00000470563 EXOC7Q9UPT5 735 aa4.8□□□□□ -1.64
RBM39-227ENST00000470563 ZNF510Q9Y2H8 683 aa4.8□□□□□ -1.64
RBM39-227ENST00000470563 TDRKHQ9Y2W6 561 aaKnown RBP4.8□□□□□ -1.64
RBM39-227ENST00000470563 KIAA1217Q5T5P2 1943 aa4.8□□□□□ -1.64
RBM39-227ENST00000470563 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 MAGEB16A2A368 324 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 MTMR11A4FU01 709 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 MSGN1A6NI15 193 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 C19orf81C9J6K1 198 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 DNALI1O14645 258 aaPredicted RBP4.79□□□□□ -1.64
RBM39-227ENST00000470563 TEX28O15482 410 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 GYG2O15488 501 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 BUB3O43684 328 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 TYROBPO43914 113 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 FGF17O60258 216 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 GRAP2O75791 330 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 PABPC4LP0CB38 370 aaKnown RBP4.79□□□□□ -1.64
RBM39-227ENST00000470563 GOLGA8HP0CJ92 632 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 DLATP10515 647 aaKnown RBP4.79□□□□□ -1.64
RBM39-227ENST00000470563 CEACAM8P31997 349 aaPredicted RBP4.79□□□□□ -1.64
RBM39-227ENST00000470563 BTDP43251 543 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 MAGEA4P43358 317 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 MAGEA8P43361 318 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 MAGEA11P43364 429 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 GPC3P51654 580 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 DLX5P56178 289 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 CDK16Q00536 496 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 ARL16Q0P5N6 197 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 HNRNPDQ14103 355 aaKnown RBP4.79□□□□□ -1.64
RBM39-227ENST00000470563 GAMTQ14353 236 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 MESDQ14696 234 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 RCN1Q15293 331 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 TMED2Q15363 201 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 KIAA1644Q3SXP7 199 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 TOR1AIP1Q5JTV8 583 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 LCN1P1Q5VSP4 162 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 GDPD4Q6W3E5 623 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 B3GLCTQ6Y288 498 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 C1orf186Q6ZWK4 172 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 CYP4V2Q6ZWL3 525 aaPredicted RBP4.79□□□□□ -1.64
RBM39-227ENST00000470563 ZNF720Q7Z2F6 126 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 TRPT1Q86TN4 253 aaKnown RBP4.79□□□□□ -1.64
RBM39-227ENST00000470563 LSMEM2Q8N112 164 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 DNAJC22Q8N4W6 341 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 SLC13A3Q8WWT9 602 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 GIMAP5Q96F15 307 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 ALG14Q96F25 216 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 DYNLL2Q96FJ2 89 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 C10orf90Q96M02 699 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 ACCSQ96QU6 501 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 LPAR4Q99677 370 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 SYT15Q9BQS2 421 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 ZNF559Q9BR84 538 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 FAM213AQ9BRX8 229 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 CCM2Q9BSQ5 444 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 WWTR1Q9GZV5 400 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 TRABDQ9H4I3 376 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 Q9H521 79 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 RNF121Q9H920 327 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 ZNF334Q9HCZ1 680 aaPredicted RBP4.79□□□□□ -1.64
RBM39-227ENST00000470563 HACD3Q9P035 362 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 NYAP2Q9P242 653 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 FAF1Q9UNN5 650 aaPredicted RBP4.79□□□□□ -1.64
RBM39-227ENST00000470563 COQ4Q9Y3A0 265 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 NRXN2Q9P2S2 1712 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 FER1L6Q2WGJ9 1857 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 UBR3Q6ZT12 1888 aa4.79□□□□□ -1.64
RBM39-227ENST00000470563 IQANK1A0A1B0GTG1 560 aa4.78□□□□□ -1.64
RBM39-227ENST00000470563 C2orf92A0A1B0GVN3 265 aa4.78□□□□□ -1.64
RBM39-227ENST00000470563 A8MUI8 341 aa4.78□□□□□ -1.64
RBM39-227ENST00000470563 F5H6K3 240 aa4.78□□□□□ -1.64
RBM39-227ENST00000470563 H0YCG3 227 aa4.78□□□□□ -1.64
RBM39-227ENST00000470563 M0R296 226 aa4.78□□□□□ -1.64
RBM39-227ENST00000470563 ALOX15BO15296 676 aa4.78□□□□□ -1.64
RBM39-227ENST00000470563 ACSL4O60488 711 aa4.78□□□□□ -1.64
RBM39-227ENST00000470563 PROSCO94903 275 aa4.78□□□□□ -1.64
RBM39-227ENST00000470563 EML2O95834 649 aa4.78□□□□□ -1.64
RBM39-227ENST00000470563 DESP17661 470 aa4.78□□□□□ -1.64
RBM39-227ENST00000470563 HMGB2P26583 209 aaKnown RBP4.78□□□□□ -1.64
RBM39-227ENST00000470563 SSTR1P30872 391 aa4.78□□□□□ -1.64
RBM39-227ENST00000470563 FOXN2P32314 431 aa4.78□□□□□ -1.64
RBM39-227ENST00000470563 RFC4P35249 363 aa4.78□□□□□ -1.64
RBM39-227ENST00000470563 HSPA13P48723 471 aa4.78□□□□□ -1.64
RBM39-227ENST00000470563 CASP4P49662 377 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms