RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 PRAMEF7Q5VXH5 474 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 KRT80Q6KB66 452 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 HEPHL1Q6MZM0 1159 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 TMEM154Q6P9G4 183 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 VANGL1Q8TAA9 524 aaPredicted RBP16.93■□□□□ 0.3
SMC4-211ENST00000469858 APOBEC4Q8WW27 367 aaKnown RBP16.93■□□□□ 0.3
SMC4-211ENST00000469858 RIT1Q92963 219 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 ZNF354BQ96LW1 612 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 DGAT2Q96PD7 388 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 EPYCQ99645 322 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 GABARAPL1Q9H0R8 117 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 CALML5Q9NZT1 146 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 PCDHGB3Q9Y5G1 929 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 CLDN16Q9Y5I7 305 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 ENPP4Q9Y6X5 453 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 SEC16AO15027 2179 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 FRYLO94915 3013 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 IGHV5-10-1A0A0J9YXX1 117 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 A8MVJ9 347 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 DNAJB5O75953 348 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 CBX7O95931 251 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 ANKRD34CP0C6C1 535 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 GCGRP47871 477 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 MAPK10P53779 464 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 CDH12P55289 794 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 HSD17B7P56937 341 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 PROX2Q3B8N5 592 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 C1orf189Q5VU69 101 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 ARHGAP22Q7Z5H3 698 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 CDRT4Q8N9R6 151 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 OR52R1Q8NGF1 315 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 TOR3AQ9H497 397 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 SCOCQ9UIL1 159 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 CDC14AQ9UNH5 594 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 LYVE1Q9Y5Y7 322 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 TNFRSF11BO00300 401 aa16.92■□□□□ 0.3
SMC4-211ENST00000469858 DSCR3O14972 297 aa16.92■□□□□ 0.3
SMC4-211ENST00000469858 HYAL3O43820 417 aaPredicted RBP16.92■□□□□ 0.3
SMC4-211ENST00000469858 IFI6P09912 130 aa16.92■□□□□ 0.3
SMC4-211ENST00000469858 ALOX5P09917 674 aa16.92■□□□□ 0.3
SMC4-211ENST00000469858 MAP4K2Q12851 820 aa16.92■□□□□ 0.3
SMC4-211ENST00000469858 GANABQ14697 944 aaKnown RBP16.92■□□□□ 0.3
SMC4-211ENST00000469858 MFSD4BQ5TF39 518 aa16.92■□□□□ 0.3
SMC4-211ENST00000469858 BMP8AQ7Z5Y6 402 aa16.92■□□□□ 0.3
SMC4-211ENST00000469858 COMTD1Q86VU5 262 aa16.92■□□□□ 0.3
SMC4-211ENST00000469858 OR52J3Q8NH60 311 aa16.92■□□□□ 0.3
SMC4-211ENST00000469858 NRBF2Q96F24 287 aa16.92■□□□□ 0.3
SMC4-211ENST00000469858 CCDC74BQ96LY2 380 aa16.92■□□□□ 0.3
SMC4-211ENST00000469858 RDH12Q96NR8 316 aa16.92■□□□□ 0.3
SMC4-211ENST00000469858 PIP5K1AQ99755 562 aa16.92■□□□□ 0.3
SMC4-211ENST00000469858 DPYSL5Q9BPU6 564 aa16.92■□□□□ 0.3
SMC4-211ENST00000469858 PIGUQ9H490 435 aa16.92■□□□□ 0.3
SMC4-211ENST00000469858 NECTIN3Q9NQS3 549 aa16.92■□□□□ 0.3
SMC4-211ENST00000469858 PDP2Q9P2J9 529 aa16.92■□□□□ 0.3
SMC4-211ENST00000469858 TMEFF2Q9UIK5 374 aaPredicted RBP16.92■□□□□ 0.3
SMC4-211ENST00000469858 DSPPQ9NZW4 1301 aa16.92■□□□□ 0.3
SMC4-211ENST00000469858 NUP210LQ5VU65 1888 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 KMT2EQ8IZD2 1858 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 A0A1B0GX78 115 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 FCMRO60667 390 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 COQ9O75208 318 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 ZIC2O95409 532 aaPredicted RBP16.91■□□□□ 0.3
SMC4-211ENST00000469858 ALPPP05187 535 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 RHCEP18577 417 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 FBLP22087 321 aaKnown RBP16.91■□□□□ 0.3
SMC4-211ENST00000469858 IGFBP5P24593 272 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 ADARB1P78563 741 aaKnown RBP16.91■□□□□ 0.3
SMC4-211ENST00000469858 MYBPC1Q00872 1141 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 ZNF155Q12901 538 aaPredicted RBP16.91■□□□□ 0.3
SMC4-211ENST00000469858 CCNJQ5T5M9 372 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 OFCC1Q8IZS5 231 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 OR4D11Q8NGI4 311 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 PIK3R3Q92569 461 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 ZNF304Q9HCX3 659 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 LANCL2Q9NS86 450 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 KIF17Q9P2E2 1029 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 C3orf18Q9UK00 162 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 MKLN1Q9UL63 735 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 ORC6Q9Y5N6 252 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 HRKO00198 91 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 IFNA16P05015 189 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 MYF6P23409 242 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 STT3AP46977 705 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 IL1RL1Q01638 556 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 ACY1Q03154 408 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 FOXD4Q12950 439 aaPredicted RBP16.91■□□□□ 0.3
SMC4-211ENST00000469858 DUSP8Q13202 625 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 DSG2Q14126 1118 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 ARHGAP11BQ3KRB8 267 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 EXOSC6Q5RKV6 272 aaKnown RBP16.91■□□□□ 0.3
SMC4-211ENST00000469858 ZCCHC12Q6PEW1 402 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 ZC3H14Q6PJT7 736 aaKnown RBP16.91■□□□□ 0.3
SMC4-211ENST00000469858 DEF8Q6ZN54 512 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 FRRS1Q6ZNA5 592 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 GALNT5Q7Z7M9 940 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 CYP4Z1Q86W10 505 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 RBM45Q8IUH3 476 aaKnown RBP16.91■□□□□ 0.3
SMC4-211ENST00000469858 LACC1Q8IV20 430 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 COX18Q8N8Q8 333 aa16.91■□□□□ 0.3
SMC4-211ENST00000469858 GPR151Q8TDV0 419 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms