RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 TIMM22Q9Y584 194 aa14.89□□□□□ -0.03
COL9A3-208ENST00000469802 SPG11Q96JI7 2443 aa14.88□□□□□ -0.03
COL9A3-208ENST00000469802 HRNRQ86YZ3 2850 aaPredicted RBP14.88□□□□□ -0.03
COL9A3-208ENST00000469802 GNG14A0A1W2PPG7 69 aa14.88□□□□□ -0.03
COL9A3-208ENST00000469802 A0A1W2PPM1 405 aa14.88□□□□□ -0.03
COL9A3-208ENST00000469802 AHRRA9YTQ3 701 aa14.88□□□□□ -0.03
COL9A3-208ENST00000469802 UGT2B11O75310 529 aa14.88□□□□□ -0.03
COL9A3-208ENST00000469802 GLRA3O75311 464 aa14.88□□□□□ -0.03
COL9A3-208ENST00000469802 TRAPPC6AO75865 159 aa14.88□□□□□ -0.03
COL9A3-208ENST00000469802 EPPINO95925 133 aa14.88□□□□□ -0.03
COL9A3-208ENST00000469802 PROCP04070 461 aa14.88□□□□□ -0.03
COL9A3-208ENST00000469802 CT45A8P0DMV1 189 aa14.88□□□□□ -0.03
COL9A3-208ENST00000469802 CT45A9P0DMV2 189 aa14.88□□□□□ -0.03
COL9A3-208ENST00000469802 CEACAM8P31997 349 aaPredicted RBP14.88□□□□□ -0.03
COL9A3-208ENST00000469802 FOXA1P55317 472 aa14.88□□□□□ -0.03
COL9A3-208ENST00000469802 TESK1Q15569 626 aa14.88□□□□□ -0.03
COL9A3-208ENST00000469802 CT45A2Q5DJT8 189 aa14.88□□□□□ -0.03
COL9A3-208ENST00000469802 DCST1Q5T197 706 aa14.88□□□□□ -0.03
COL9A3-208ENST00000469802 ANGPTL8Q6UXH0 198 aa14.88□□□□□ -0.03
COL9A3-208ENST00000469802 LACC1Q8IV20 430 aa14.88□□□□□ -0.03
COL9A3-208ENST00000469802 CCDC116Q8IYX3 515 aa14.88□□□□□ -0.03
COL9A3-208ENST00000469802 SAMD14Q8IZD0 417 aaPredicted RBP14.88□□□□□ -0.03
COL9A3-208ENST00000469802 OR9A2Q8NGT5 310 aa14.88□□□□□ -0.03
COL9A3-208ENST00000469802 RNF138Q8WVD3 245 aa14.88□□□□□ -0.03
COL9A3-208ENST00000469802 EXOSC8Q96B26 276 aaKnown RBP14.88□□□□□ -0.03
COL9A3-208ENST00000469802 CCDC126Q96EE4 140 aa14.88□□□□□ -0.03
COL9A3-208ENST00000469802 SLC35A4Q96G79 324 aa14.88□□□□□ -0.03
COL9A3-208ENST00000469802 VSTM2LQ96N03 204 aa14.88□□□□□ -0.03
COL9A3-208ENST00000469802 UGT2B28Q9BY64 529 aa14.88□□□□□ -0.03
COL9A3-208ENST00000469802 SLC24A3Q9HC58 644 aa14.88□□□□□ -0.03
COL9A3-208ENST00000469802 MED12LQ86YW9 2145 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 MED13LQ71F56 2210 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 CCDC151A5D8V7 595 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 PRAMEF25A6NGN4 478 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 OR6C70A6NIJ9 312 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 HSPB2A8KAH6 182 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 GNB5O14775 395 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 ICOSLGO75144 302 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 BCAS2O75934 225 aaPredicted RBP14.87□□□□□ -0.03
COL9A3-208ENST00000469802 SHBGP04278 402 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 BMP7P18075 431 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 TIMP3P35625 211 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 NAA20P61599 178 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 ZNF763Q0D2J5 394 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 HEPACAMQ14CZ8 416 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 HSPB2Q16082 182 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 EIPR1Q53HC9 387 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 POMZP3Q6PJE2 187 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 NPSR1Q6W5P4 371 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 FRMD7Q6ZUT3 714 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 PM20D2Q8IYS1 436 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 FAM83FQ8NEG4 500 aaPredicted RBP14.87□□□□□ -0.03
COL9A3-208ENST00000469802 TNIP2Q8NFZ5 429 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 OR1J4Q8NGS1 313 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.87□□□□□ -0.03
COL9A3-208ENST00000469802 TMBIM1Q969X1 311 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 EBPLQ9BY08 206 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 ANKRA2Q9H9E1 313 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 GALNT9Q9HCQ5 603 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 MID1IP1Q9NPA3 183 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 SLC35C2Q9NQQ7 365 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 SLC6A5Q9Y345 797 aa14.87□□□□□ -0.03
COL9A3-208ENST00000469802 H3BQF6 201 aa14.86□□□□□ -0.03
COL9A3-208ENST00000469802 PLOD3O60568 738 aa14.86□□□□□ -0.03
COL9A3-208ENST00000469802 PLIN3O60664 434 aa14.86□□□□□ -0.03
COL9A3-208ENST00000469802 ANXA4P09525 319 aaPredicted RBP14.86□□□□□ -0.03
COL9A3-208ENST00000469802 MYL2P10916 166 aa14.86□□□□□ -0.03
COL9A3-208ENST00000469802 DDCP20711 480 aa14.86□□□□□ -0.03
COL9A3-208ENST00000469802 NAGLUP54802 743 aa14.86□□□□□ -0.03
COL9A3-208ENST00000469802 WNT3P56703 355 aa14.86□□□□□ -0.03
COL9A3-208ENST00000469802 CORO7P57737 925 aa14.86□□□□□ -0.03
COL9A3-208ENST00000469802 PSPHP78330 225 aa14.86□□□□□ -0.03
COL9A3-208ENST00000469802 FBXL19-AS1Q494R0 122 aa14.86□□□□□ -0.03
COL9A3-208ENST00000469802 WIPI1Q5MNZ9 446 aaPredicted RBP14.86□□□□□ -0.03
COL9A3-208ENST00000469802 NSUN5P2Q63ZY6 315 aa14.86□□□□□ -0.03
COL9A3-208ENST00000469802 TRIM46Q7Z4K8 759 aa14.86□□□□□ -0.03
COL9A3-208ENST00000469802 WDR53Q7Z5U6 358 aaPredicted RBP14.86□□□□□ -0.03
COL9A3-208ENST00000469802 TDRPQ86YL5 185 aa14.86□□□□□ -0.03
COL9A3-208ENST00000469802 WDSUB1Q8N9V3 476 aa14.86□□□□□ -0.03
COL9A3-208ENST00000469802 OR7G2Q8NG99 324 aa14.86□□□□□ -0.03
COL9A3-208ENST00000469802 KAT2AQ92830 837 aa14.86□□□□□ -0.03
COL9A3-208ENST00000469802 WDYHV1Q96HA8 205 aa14.86□□□□□ -0.03
COL9A3-208ENST00000469802 SH3GL2Q99962 352 aa14.86□□□□□ -0.03
COL9A3-208ENST00000469802 ZNF559Q9BR84 538 aa14.86□□□□□ -0.03
COL9A3-208ENST00000469802 OR2B2Q9GZK3 357 aa14.86□□□□□ -0.03
COL9A3-208ENST00000469802 PPCSQ9HAB8 311 aa14.86□□□□□ -0.03
COL9A3-208ENST00000469802 TNFRSF12AQ9NP84 129 aa14.86□□□□□ -0.03
COL9A3-208ENST00000469802 PFDN4Q9NQP4 134 aa14.86□□□□□ -0.03
COL9A3-208ENST00000469802 GIMAP4Q9NUV9 329 aa14.86□□□□□ -0.03
COL9A3-208ENST00000469802 KLRF1Q9NZS2 232 aa14.86□□□□□ -0.03
COL9A3-208ENST00000469802 EXO1Q9UQ84 846 aaKnown RBP14.86□□□□□ -0.03
COL9A3-208ENST00000469802 PCNX3Q9H6A9 2034 aa14.85□□□□□ -0.03
COL9A3-208ENST00000469802 MBD3L4A6NDZ8 208 aaPredicted RBP14.85□□□□□ -0.03
COL9A3-208ENST00000469802 MBD3L3A6NE82 208 aaPredicted RBP14.85□□□□□ -0.03
COL9A3-208ENST00000469802 MBD3L5A6NJ08 208 aaPredicted RBP14.85□□□□□ -0.03
COL9A3-208ENST00000469802 CD8B2A6NJW9 211 aa14.85□□□□□ -0.03
COL9A3-208ENST00000469802 MYO1GB0I1T2 1018 aa14.85□□□□□ -0.03
COL9A3-208ENST00000469802 TSPAN2O60636 221 aa14.85□□□□□ -0.03
COL9A3-208ENST00000469802 ABCB7O75027 752 aa14.85□□□□□ -0.03
COL9A3-208ENST00000469802 NME6O75414 186 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms