RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 PDP1Q9P0J1 537 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF624Q9P2J8 865 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 OR12D3Q9UGF7 316 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 SUSD2Q9UGT4 822 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 CYTH4Q9UIA0 394 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 LAMP5Q9UJQ1 280 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 FEM1BQ9UK73 627 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 DUSP12Q9UNI6 340 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 MINPP1Q9UNW1 487 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 ERVK-19Q9WJR5 959 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 TP53TG5Q9Y2B4 290 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 CARHSP1Q9Y2V2 147 aaKnown RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 KCNIP3Q9Y2W7 256 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 DNAJC15Q9Y5T4 150 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 A0A096LPI6 279 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 TEX13CA0A0J9YWL9 993 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 A0A1B0GUH1 482 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 TRDV1A0A1B0GX56 115 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 PLSCR5A0PG75 271 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 SHISA3A0PJX4 238 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 BLACEA4D250 179 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 SYNDIG1LA6NDD5 238 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 TMEM210A6NLX4 147 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 ISM1B1AKI9 464 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 CHURC1-FNTBB4DL54 471 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 PRR23D1E9PI22 279 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-207ENST00000468925 TSTD3H0UI37 97 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 BLOC1S5-TXNDC5H3BN57 136 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 STMND1H3BQB6 276 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 H7C1Q1 480 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 PIP5K1BO14986 540 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 CTDSPLO15194 276 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 CHST10O43529 356 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 SSNA1O43805 119 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 CDC123O75794 336 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-207ENST00000468925 PGK1P00558 417 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 F10P00742 488 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 POMCP01189 267 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 HPXP02790 462 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 SOD2P04179 222 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 IL5P05113 134 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 CD63P08962 238 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 HOXC4P09017 264 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-207ENST00000468925 PRR23D2P0DMB1 279 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-207ENST00000468925 NR2F6P10588 404 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 GABRA1P14867 456 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 CSF2RAP15509 400 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 MGMTP16455 207 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 ENGP17813 658 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 HDCP19113 662 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 YWHAQP27348 245 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 CERS1P27544 350 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 SDHAP31040 664 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 GABRA5P31644 462 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 CTNNB1P35222 781 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 GPX4P36969 197 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-207ENST00000468925 ACTR1BP42025 376 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 CRYBB2P43320 205 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 LSSP48449 732 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 MAN2A2P49641 1150 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 STK19P49842 368 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-207ENST00000468925 HSD17B7P56937 341 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 BPIFB3P59826 476 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 SKP1P63208 163 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 PLIN5Q00G26 463 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 MTM1Q13496 603 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 DOCK1Q14185 1865 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 PTPRRQ15256 657 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 TRAM1Q15629 374 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF239Q16600 458 aaKnown RBP4.59□□□□□ -1.67
SF3B1-207ENST00000468925 NTRK2Q16620 822 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 MAPKAPK3Q16644 382 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 PLK5Q496M5 336 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 PYCR3Q53H96 274 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 UNC50Q53HI1 259 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 XKR9Q5GH70 373 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 XKR3Q5GH77 459 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 PAGE3Q5JUK9 113 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 TMEM201Q5SNT2 666 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 SAPCD1Q5SSQ6 148 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 IDNKQ5T6J7 187 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 ATPAF1Q5TC12 328 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-207ENST00000468925 KCTD11Q693B1 232 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 CRTC1Q6UUV9 634 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 GSG1LQ6UXU4 331 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 LINGO4Q6UY18 593 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 TPGS1Q6ZTW0 290 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 TMEM179Q6ZVK1 233 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 PID1Q7Z2X4 250 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 TRMT11Q7Z4G4 463 aaKnown RBP4.59□□□□□ -1.67
SF3B1-207ENST00000468925 ISCA2Q86U28 154 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 CYP4Z1Q86W10 505 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 CALHM3Q86XJ0 350 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 CCDC71Q8IV32 467 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-207ENST00000468925 CERS5Q8N5B7 392 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 POMGNT2Q8NAT1 580 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 BEST4Q8NFU0 473 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 OR2T35Q8NGX2 323 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 OR5J2Q8NH18 312 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 OR6X1Q8NH79 312 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms