RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 KCNN3Q9UGI6 736 aa19.9■□□□□ 0.78
TTC28-204ENST00000468807 SMIM23A6NLE4 172 aa19.89■□□□□ 0.77
TTC28-204ENST00000468807 UGT2B11O75310 529 aa19.89■□□□□ 0.77
TTC28-204ENST00000468807 GLRA3O75311 464 aa19.89■□□□□ 0.77
TTC28-204ENST00000468807 NME6O75414 186 aaPredicted RBP19.89■□□□□ 0.77
TTC28-204ENST00000468807 REM1O75628 298 aa19.89■□□□□ 0.77
TTC28-204ENST00000468807 ZWINTO95229 277 aa19.89■□□□□ 0.77
TTC28-204ENST00000468807 DRD5P21918 477 aa19.89■□□□□ 0.77
TTC28-204ENST00000468807 PTPN6P29350 595 aa19.89■□□□□ 0.77
TTC28-204ENST00000468807 SOX18P35713 384 aa19.89■□□□□ 0.77
TTC28-204ENST00000468807 PPICP45877 212 aa19.89■□□□□ 0.77
TTC28-204ENST00000468807 SLCO1A2P46721 670 aa19.89■□□□□ 0.77
TTC28-204ENST00000468807 SNTB1Q13884 538 aaKnown RBP19.89■□□□□ 0.77
TTC28-204ENST00000468807 ERCC6LQ2NKX8 1250 aa19.89■□□□□ 0.77
TTC28-204ENST00000468807 SLC30A6Q6NXT4 461 aa19.89■□□□□ 0.77
TTC28-204ENST00000468807 SEM1Q6ZVN7 128 aa19.89■□□□□ 0.77
TTC28-204ENST00000468807 YRDCQ86U90 279 aaKnown RBP19.89■□□□□ 0.77
TTC28-204ENST00000468807 CCDC63Q8NA47 563 aa19.89■□□□□ 0.77
TTC28-204ENST00000468807 TNIP2Q8NFZ5 429 aa19.89■□□□□ 0.77
TTC28-204ENST00000468807 MZB1Q8WU39 189 aa19.89■□□□□ 0.77
TTC28-204ENST00000468807 UBLCP1Q8WVY7 318 aaPredicted RBP19.89■□□□□ 0.77
TTC28-204ENST00000468807 TRIM44Q96DX7 344 aaPredicted RBP19.89■□□□□ 0.77
TTC28-204ENST00000468807 CCDC126Q96EE4 140 aa19.89■□□□□ 0.77
TTC28-204ENST00000468807 SLC24A3Q9HC58 644 aa19.89■□□□□ 0.77
TTC28-204ENST00000468807 EMCNQ9ULC0 261 aa19.89■□□□□ 0.77
TTC28-204ENST00000468807 F8P00451 2351 aa19.88■□□□□ 0.77
TTC28-204ENST00000468807 PRAMEF25A6NGN4 478 aa19.88■□□□□ 0.77
TTC28-204ENST00000468807 FRG2CA6NGY1 282 aa19.88■□□□□ 0.77
TTC28-204ENST00000468807 KDM4EB2RXH2 506 aaPredicted RBP19.88■□□□□ 0.77
TTC28-204ENST00000468807 ICOSLGO75144 302 aa19.88■□□□□ 0.77
TTC28-204ENST00000468807 BCAS2O75934 225 aaPredicted RBP19.88■□□□□ 0.77
TTC28-204ENST00000468807 ANXA4P09525 319 aaPredicted RBP19.88■□□□□ 0.77
TTC28-204ENST00000468807 BMP7P18075 431 aa19.88■□□□□ 0.77
TTC28-204ENST00000468807 POU3F2P20265 443 aaPredicted RBP19.88■□□□□ 0.77
TTC28-204ENST00000468807 UQCRC1P31930 480 aa19.88■□□□□ 0.77
TTC28-204ENST00000468807 GCKP35557 465 aa19.88■□□□□ 0.77
TTC28-204ENST00000468807 KRT20P35900 424 aa19.88■□□□□ 0.77
TTC28-204ENST00000468807 FOXA1P55317 472 aa19.88■□□□□ 0.77
TTC28-204ENST00000468807 CFAP157Q5JU67 520 aa19.88■□□□□ 0.77
TTC28-204ENST00000468807 ZYG11AQ6WRX3 759 aa19.88■□□□□ 0.77
TTC28-204ENST00000468807 LACC1Q8IV20 430 aa19.88■□□□□ 0.77
TTC28-204ENST00000468807 SAMD14Q8IZD0 417 aaPredicted RBP19.88■□□□□ 0.77
TTC28-204ENST00000468807 LRRN4CLQ8ND94 238 aa19.88■□□□□ 0.77
TTC28-204ENST00000468807 FAM83FQ8NEG4 500 aaPredicted RBP19.88■□□□□ 0.77
TTC28-204ENST00000468807 RDH11Q8TC12 318 aa19.88■□□□□ 0.77
TTC28-204ENST00000468807 ZNF675Q8TD23 568 aa19.88■□□□□ 0.77
TTC28-204ENST00000468807 ABTB1Q969K4 478 aaPredicted RBP19.88■□□□□ 0.77
TTC28-204ENST00000468807 COL21A1Q96P44 957 aa19.88■□□□□ 0.77
TTC28-204ENST00000468807 BBS4Q96RK4 519 aa19.88■□□□□ 0.77
TTC28-204ENST00000468807 TRIB1Q96RU8 372 aa19.88■□□□□ 0.77
TTC28-204ENST00000468807 UGT2B28Q9BY64 529 aa19.88■□□□□ 0.77
TTC28-204ENST00000468807 SERHLQ9NQF3 203 aa19.88■□□□□ 0.77
TTC28-204ENST00000468807 SLC35C2Q9NQQ7 365 aa19.88■□□□□ 0.77
TTC28-204ENST00000468807 SPG11Q96JI7 2443 aa19.88■□□□□ 0.77
TTC28-204ENST00000468807 MED12Q93074 2177 aa19.88■□□□□ 0.77
TTC28-204ENST00000468807 G3V2L1 256 aa19.87■□□□□ 0.77
TTC28-204ENST00000468807 UBFD1O14562 309 aaKnown RBP19.87■□□□□ 0.77
TTC28-204ENST00000468807 DVL2O14641 736 aa19.87■□□□□ 0.77
TTC28-204ENST00000468807 SNPHO15079 494 aa19.87■□□□□ 0.77
TTC28-204ENST00000468807 EPPINO95925 133 aa19.87■□□□□ 0.77
TTC28-204ENST00000468807 IL2RAP01589 272 aa19.87■□□□□ 0.77
TTC28-204ENST00000468807 SHBGP04278 402 aa19.87■□□□□ 0.77
TTC28-204ENST00000468807 DLX5P56178 289 aa19.87■□□□□ 0.77
TTC28-204ENST00000468807 CORO7P57737 925 aa19.87■□□□□ 0.77
TTC28-204ENST00000468807 SNTA1Q13424 505 aa19.87■□□□□ 0.77
TTC28-204ENST00000468807 SF3B4Q15427 424 aaKnown RBP eCLIP19.87■□□□□ 0.77
TTC28-204ENST00000468807 DCST1Q5T197 706 aa19.87■□□□□ 0.77
TTC28-204ENST00000468807 VASNQ6EMK4 673 aa19.87■□□□□ 0.77
TTC28-204ENST00000468807 ARSKQ6UWY0 536 aa19.87■□□□□ 0.77
TTC28-204ENST00000468807 FAM9CQ8IZT9 166 aa19.87■□□□□ 0.77
TTC28-204ENST00000468807 NAXEQ8NCW5 288 aa19.87■□□□□ 0.77
TTC28-204ENST00000468807 OR14L1PQ8NHC6 308 aa19.87■□□□□ 0.77
TTC28-204ENST00000468807 TMCO6Q96DC7 493 aa19.87■□□□□ 0.77
TTC28-204ENST00000468807 ADOQ96SZ5 270 aa19.87■□□□□ 0.77
TTC28-204ENST00000468807 PRDM14Q9GZV8 571 aa19.87■□□□□ 0.77
TTC28-204ENST00000468807 GPR55Q9Y2T6 319 aaPredicted RBP19.87■□□□□ 0.77
TTC28-204ENST00000468807 L3MBTL1Q9Y468 752 aa19.87■□□□□ 0.77
TTC28-204ENST00000468807 TO15178 435 aa19.86■□□□□ 0.77
TTC28-204ENST00000468807 ERN1O75460 977 aaKnown RBP19.86■□□□□ 0.77
TTC28-204ENST00000468807 IL12BP29460 328 aa19.86■□□□□ 0.77
TTC28-204ENST00000468807 MPIP34949 423 aa19.86■□□□□ 0.77
TTC28-204ENST00000468807 PTGDSP41222 190 aa19.86■□□□□ 0.77
TTC28-204ENST00000468807 NAGLUP54802 743 aa19.86■□□□□ 0.77
TTC28-204ENST00000468807 ZNF763Q0D2J5 394 aa19.86■□□□□ 0.77
TTC28-204ENST00000468807 C2orf80Q0P641 193 aa19.86■□□□□ 0.77
TTC28-204ENST00000468807 ZZZ3Q8IYH5 903 aa19.86■□□□□ 0.77
TTC28-204ENST00000468807 CNPY4Q8N129 248 aa19.86■□□□□ 0.77
TTC28-204ENST00000468807 RELL2Q8NC24 303 aaPredicted RBP19.86■□□□□ 0.77
TTC28-204ENST00000468807 SHCBP1LQ9BZQ2 653 aa19.86■□□□□ 0.77
TTC28-204ENST00000468807 MIEF1Q9NQG6 463 aa19.86■□□□□ 0.77
TTC28-204ENST00000468807 POLR3HQ9Y535 204 aaPredicted RBP19.86■□□□□ 0.77
TTC28-204ENST00000468807 KIAA1549Q9HCM3 1950 aa19.85■□□□□ 0.77
TTC28-204ENST00000468807 OR6C70A6NIJ9 312 aa19.85■□□□□ 0.77
TTC28-204ENST00000468807 PROCP04070 461 aa19.85■□□□□ 0.77
TTC28-204ENST00000468807 ZNF155Q12901 538 aaPredicted RBP19.85■□□□□ 0.77
TTC28-204ENST00000468807 CCDC153Q494R4 210 aa19.85■□□□□ 0.77
TTC28-204ENST00000468807 NHSL2Q5HYW2 709 aa19.85■□□□□ 0.77
TTC28-204ENST00000468807 NSUN5P2Q63ZY6 315 aa19.85■□□□□ 0.77
TTC28-204ENST00000468807 TMEM81Q6P7N7 255 aa19.85■□□□□ 0.77
TTC28-204ENST00000468807 GALNT18Q6P9A2 607 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms