RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 GBAP04062 536 aa13.4□□□□□ -0.26
COL27A1-203ENST00000468565 KRT6BP04259 564 aa13.4□□□□□ -0.26
COL27A1-203ENST00000468565 IGKV3-11P04433 115 aa13.4□□□□□ -0.26
COL27A1-203ENST00000468565 GPX3P22352 226 aa13.4□□□□□ -0.26
COL27A1-203ENST00000468565 KRT6CP48668 564 aa13.4□□□□□ -0.26
COL27A1-203ENST00000468565 ALDH6A1Q02252 535 aaKnown RBP13.4□□□□□ -0.26
COL27A1-203ENST00000468565 KRTCAP3Q53RY4 240 aa13.4□□□□□ -0.26
COL27A1-203ENST00000468565 SGO1Q5FBB7 561 aa13.4□□□□□ -0.26
COL27A1-203ENST00000468565 LPCAT4Q643R3 524 aa13.4□□□□□ -0.26
COL27A1-203ENST00000468565 MIER2Q8N344 545 aa13.4□□□□□ -0.26
COL27A1-203ENST00000468565 ZNF321PQ8N8H1 164 aa13.4□□□□□ -0.26
COL27A1-203ENST00000468565 POGLUT1Q8NBL1 392 aa13.4□□□□□ -0.26
COL27A1-203ENST00000468565 ROPN1LQ96C74 230 aa13.4□□□□□ -0.26
COL27A1-203ENST00000468565 ASB9Q96DX5 294 aa13.4□□□□□ -0.26
COL27A1-203ENST00000468565 FBXL20Q96IG2 436 aa13.4□□□□□ -0.26
COL27A1-203ENST00000468565 LRGUKQ96M69 825 aa13.4□□□□□ -0.26
COL27A1-203ENST00000468565 RASL10BQ96S79 203 aa13.4□□□□□ -0.26
COL27A1-203ENST00000468565 SPAG4Q9NPE6 437 aa13.4□□□□□ -0.26
COL27A1-203ENST00000468565 A0A1B0GUH1 482 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 GUCY1B2O75343 617 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 OR2J2O76002 312 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 KLK1P06870 262 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 PEX2P28328 305 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 KCNK10P57789 538 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 MRPS22P82650 360 aaKnown RBP13.39□□□□□ -0.27
COL27A1-203ENST00000468565 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.39□□□□□ -0.273e-10■□□□□ 11.1
COL27A1-203ENST00000468565 CCNYL2Q5T2Q4 361 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 COMMD6Q7Z4G1 85 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 SPATA19Q7Z5L4 167 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 RNF148Q8N7C7 305 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 CDYL2Q8N8U2 506 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 NUBPLQ8TB37 319 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 ASB15Q8WXK1 588 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 PPWD1Q96BP3 646 aaKnown RBP13.39□□□□□ -0.27
COL27A1-203ENST00000468565 TUBGCP3Q96CW5 907 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 SENP5Q96HI0 755 aaPredicted RBP13.39□□□□□ -0.27
COL27A1-203ENST00000468565 GPR137Q96N19 417 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 TEX10Q9NXF1 929 aaPredicted RBP13.39□□□□□ -0.27
COL27A1-203ENST00000468565 NDUFAF1Q9Y375 327 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 EXPH5Q8NEV8 1989 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 GLOD5A6NK44 160 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 A8MVJ9 347 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 KLRC4-KLRK1H3BQV0 150 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 WWP2O00308 870 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 MANBAO00462 879 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 ACOT8O14734 319 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 LRRTM2O43300 516 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 STAMBPO95630 424 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 ALDOCP09972 364 aaKnown RBP13.39□□□□□ -0.27
COL27A1-203ENST00000468565 NUDT7P0C024 238 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 SLC35E2P0CK97 266 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 UROSP10746 265 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 MAPK12P53778 367 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 FOXA1P55317 472 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 PER3P56645 1201 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 MS4A2Q01362 244 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 RBPJQ06330 500 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 TRAP1Q12931 704 aaKnown RBP13.39□□□□□ -0.27
COL27A1-203ENST00000468565 CSTF3Q12996 717 aaKnown RBP13.39□□□□□ -0.27
COL27A1-203ENST00000468565 RPS6KA2Q15349 733 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 LRRC36Q1X8D7 754 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 GRAMD1BQ3KR37 738 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 SAMD4BQ5PRF9 694 aaKnown RBP13.39□□□□□ -0.27
COL27A1-203ENST00000468565 OGFRL1Q5TC84 451 aaPredicted RBP13.39□□□□□ -0.27
COL27A1-203ENST00000468565 PAOXQ6QHF9 649 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 DGAT2L6Q6ZPD8 337 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 SPATA24Q86W54 205 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 SIAH3Q8IW03 269 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 RELTQ969Z4 430 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 TIMMDC1Q9NPL8 285 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 HPF1Q9NWY4 346 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 DTNAQ9Y4J8 743 aa13.39□□□□□ -0.27
COL27A1-203ENST00000468565 OR10H2O60403 315 aa13.38□□□□□ -0.27
COL27A1-203ENST00000468565 ESRRBO95718 433 aa13.38□□□□□ -0.27
COL27A1-203ENST00000468565 LINC00032P0C843 101 aa13.38□□□□□ -0.27
COL27A1-203ENST00000468565 IDO1P14902 403 aa13.38□□□□□ -0.27
COL27A1-203ENST00000468565 HMOX2P30519 316 aa13.38□□□□□ -0.27
COL27A1-203ENST00000468565 TRIM25Q14258 630 aaKnown RBP13.38□□□□□ -0.27
COL27A1-203ENST00000468565 MPEG1Q2M385 716 aa13.38□□□□□ -0.27
COL27A1-203ENST00000468565 NDUFAF5Q5TEU4 345 aa13.38□□□□□ -0.27
COL27A1-203ENST00000468565 OGFOD2Q6N063 350 aa13.38□□□□□ -0.27
COL27A1-203ENST00000468565 C16orf47Q6ZP98 133 aaPredicted RBP13.38□□□□□ -0.27
COL27A1-203ENST00000468565 ICA1LQ8NDH6 482 aa13.38□□□□□ -0.27
COL27A1-203ENST00000468565 METTL6Q8TCB7 284 aa13.38□□□□□ -0.27
COL27A1-203ENST00000468565 RIT1Q92963 219 aa13.38□□□□□ -0.27
COL27A1-203ENST00000468565 KCNA7Q96RP8 456 aa13.38□□□□□ -0.27
COL27A1-203ENST00000468565 CCT7Q99832 543 aa13.38□□□□□ -0.27
COL27A1-203ENST00000468565 LIN28AQ9H9Z2 209 aaKnown RBP13.38□□□□□ -0.27
COL27A1-203ENST00000468565 VPS29Q9UBQ0 182 aa13.38□□□□□ -0.27
COL27A1-203ENST00000468565 ERVK-11Q9UQG0 969 aa13.38□□□□□ -0.27
COL27A1-203ENST00000468565 C1orf226A1L170 272 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 WASHC1A8K0Z3 465 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 NR5A2O00482 541 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 PGRMC2O15173 223 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 ULK1O75385 1050 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 OR6B1O95007 311 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 UQCRBP14927 111 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 ZNF24P17028 368 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 TCN1P20061 433 aaPredicted RBP13.37□□□□□ -0.27
COL27A1-203ENST00000468565 MSX2P35548 267 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms