RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 HMGN2P05204 90 aaKnown RBP7.72□□□□□ -1.17
BRCA1-208ENST00000468300 CD59P13987 128 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 HOXC12P31275 282 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 ZFP36L1Q07352 338 aaKnown RBP7.72□□□□□ -1.17
BRCA1-208ENST00000468300 ATP6AP1Q15904 470 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 CRB2Q5IJ48 1285 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 RPS26P11Q5JNZ5 115 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-208ENST00000468300 GCNT6Q5T4J0 391 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 TBPL2Q6SJ96 375 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 COX15Q7KZN9 410 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 B3GNT8Q7Z7M8 397 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 NKAIN3Q8N8D7 197 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 PPWD1Q96BP3 646 aaKnown RBP7.72□□□□□ -1.17
BRCA1-208ENST00000468300 PEX11GQ96HA9 241 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 PYURFQ96I23 114 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 C7orf34Q96L11 122 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 OR51I1Q9H343 314 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 DHCR7Q9UBM7 475 aaKnown RBP7.72□□□□□ -1.17
BRCA1-208ENST00000468300 TEKT2Q9UIF3 430 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 C15orf41Q9Y2V0 281 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 AK5Q9Y6K8 562 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 ZNF780BQ9Y6R6 833 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 MAU2Q9Y6X3 613 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 RALGAPA1Q6GYQ0 2036 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 HRKO00198 91 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 SNPHO15079 494 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 GSTA4O15217 222 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 CBFA2T3O75081 653 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 OR2B3O76000 313 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 EPPINO95925 133 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 RAP2AP10114 183 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 APEHP13798 732 aaKnown RBP7.72□□□□□ -1.17
BRCA1-208ENST00000468300 PORP16435 677 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-208ENST00000468300 ACP1P24666 158 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 AQP4P55087 323 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 RBBP4Q09028 425 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 TCF15Q12870 199 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 SCARB2Q14108 478 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 SPIDRQ14159 915 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 GRM7Q14831 915 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 SF3A2Q15428 464 aaKnown RBP7.72□□□□□ -1.17
BRCA1-208ENST00000468300 TRIP10Q15642 601 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 SYPL1Q16563 259 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 TLDC1Q6P9B6 456 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 EIF3MQ7L2H7 374 aaKnown RBP7.72□□□□□ -1.17
BRCA1-208ENST00000468300 WDR53Q7Z5U6 358 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-208ENST00000468300 TMEM179BQ7Z7N9 219 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 BMPERQ8N8U9 685 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 TTC29Q8NA56 475 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-208ENST00000468300 OR51Q1Q8NH59 317 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 FAM162AQ96A26 154 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 SGK3Q96BR1 496 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 INTS12Q96CB8 462 aaKnown RBP7.72□□□□□ -1.17
BRCA1-208ENST00000468300 RNF145Q96MT1 663 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 ZNF570Q96NI8 536 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 WFDC6Q9BQY6 131 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 ZPBPQ9BS86 351 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 MAGIXQ9H6Y5 334 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 FGF21Q9NSA1 209 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 ZCCHC3Q9NUD5 404 aaKnown RBP7.72□□□□□ -1.17
BRCA1-208ENST00000468300 VNN3Q9NY84 501 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 MAT2BQ9NZL9 334 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 ENTPD4Q9Y227 616 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 SOCS2O14508 198 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 KHNYNO15037 678 aaKnown RBP7.72□□□□□ -1.17
BRCA1-208ENST00000468300 EMC8O43402 210 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 OR12D1P0DN82 309 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 MATN1P21941 496 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 S100A1P23297 94 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 AQP1P29972 269 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 PPP2R1BP30154 601 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 OR1D4P47884 311 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 CSNK2BP67870 215 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 VLDLRP98155 873 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 CDK6Q00534 326 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 DYNC1I2Q13409 638 aaKnown RBP7.72□□□□□ -1.17
BRCA1-208ENST00000468300 ZNF385CQ66K41 422 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-208ENST00000468300 LGI4Q8N135 537 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 LSMEM1Q8N8F7 131 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 C11orf65Q8NCR3 313 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 ZNF675Q8TD23 568 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 ATOH1Q92858 354 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-208ENST00000468300 NAT6Q93015 286 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 RNF31Q96EP0 1072 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 MMABQ96EY8 250 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-208ENST00000468300 SLC47A1Q96FL8 570 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 MAGED4Q96JG8 741 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 YIPF4Q9BSR8 244 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 LIN28AQ9H9Z2 209 aaKnown RBP7.72□□□□□ -1.17
BRCA1-208ENST00000468300 NECTIN3Q9NQS3 549 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 ABCG2Q9UNQ0 655 aa7.72□□□□□ -1.17
BRCA1-208ENST00000468300 IGKV3D-11A0A0A0MRZ8 115 aa7.71□□□□□ -1.17
BRCA1-208ENST00000468300 C7orf72A4D263 438 aa7.71□□□□□ -1.17
BRCA1-208ENST00000468300 A8MVJ9 347 aa7.71□□□□□ -1.17
BRCA1-208ENST00000468300 PRR33A8MZF0 331 aa7.71□□□□□ -1.17
BRCA1-208ENST00000468300 TPST1O60507 370 aa7.71□□□□□ -1.17
BRCA1-208ENST00000468300 SEMA7AO75326 666 aa7.71□□□□□ -1.17
BRCA1-208ENST00000468300 CDC123O75794 336 aaPredicted RBP7.71□□□□□ -1.17
BRCA1-208ENST00000468300 CBX7O95931 251 aa7.71□□□□□ -1.17
BRCA1-208ENST00000468300 FHP07954 510 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms