RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 CPOXP36551 454 aa6.4□□□□□ -1.38
SCAF4-204ENST00000467731 FOLR3P41439 243 aa6.4□□□□□ -1.38
SCAF4-204ENST00000467731 BIKQ13323 160 aa6.4□□□□□ -1.38
SCAF4-204ENST00000467731 DNASE1L3Q13609 305 aa6.4□□□□□ -1.38
SCAF4-204ENST00000467731 ZNF628Q5EBL2 1059 aa6.4□□□□□ -1.38
SCAF4-204ENST00000467731 CORO6Q6QEF8 472 aa6.4□□□□□ -1.38
SCAF4-204ENST00000467731 FAM111BQ6SJ93 734 aa6.4□□□□□ -1.38
SCAF4-204ENST00000467731 SZRD1Q7Z422 152 aa6.4□□□□□ -1.38
SCAF4-204ENST00000467731 GALNT12Q8IXK2 581 aa6.4□□□□□ -1.38
SCAF4-204ENST00000467731 MSRB3Q8IXL7 192 aa6.4□□□□□ -1.38
SCAF4-204ENST00000467731 SIMC1Q8NDZ2 872 aa6.4□□□□□ -1.38
SCAF4-204ENST00000467731 OR7G2Q8NG99 324 aa6.4□□□□□ -1.38
SCAF4-204ENST00000467731 PSMA8Q8TAA3 256 aa6.4□□□□□ -1.38
SCAF4-204ENST00000467731 METTL21AQ8WXB1 218 aa6.4□□□□□ -1.38
SCAF4-204ENST00000467731 RIT1Q92963 219 aa6.4□□□□□ -1.38
SCAF4-204ENST00000467731 ROPN1LQ96C74 230 aa6.4□□□□□ -1.38
SCAF4-204ENST00000467731 C8orf44Q96CB5 159 aa6.4□□□□□ -1.38
SCAF4-204ENST00000467731 SLC7A6OSQ96CW6 309 aaPredicted RBP6.4□□□□□ -1.38
SCAF4-204ENST00000467731 FAM120BQ96EK7 910 aaKnown RBP6.4□□□□□ -1.38
SCAF4-204ENST00000467731 MAGED4Q96JG8 741 aa6.4□□□□□ -1.38
SCAF4-204ENST00000467731 CXorf21Q9HAI6 301 aa6.4□□□□□ -1.38
SCAF4-204ENST00000467731 C8orf4Q9NR00 106 aa6.4□□□□□ -1.38
SCAF4-204ENST00000467731 TAS2R1Q9NYW7 299 aa6.4□□□□□ -1.38
SCAF4-204ENST00000467731 MAT2BQ9NZL9 334 aa6.4□□□□□ -1.38
SCAF4-204ENST00000467731 MRPS18BQ9Y676 258 aaKnown RBP6.4□□□□□ -1.38
SCAF4-204ENST00000467731 ANKRD11Q6UB99 2663 aaPredicted RBP6.4□□□□□ -1.38
SCAF4-204ENST00000467731 DOCK10Q96BY6 2186 aa6.4□□□□□ -1.38
SCAF4-204ENST00000467731 MED13Q9UHV7 2174 aa6.4□□□□□ -1.38
SCAF4-204ENST00000467731 SPENQ96T58 3664 aaKnown RBP6.4□□□□□ -1.38
SCAF4-204ENST00000467731 URB1O60287 2271 aaKnown RBP6.4□□□□□ -1.39
SCAF4-204ENST00000467731 IGHV3-20A0A0C4DH32 117 aa6.4□□□□□ -1.39
SCAF4-204ENST00000467731 C21orf140B9A014 251 aa6.4□□□□□ -1.39
SCAF4-204ENST00000467731 HRKO00198 91 aa6.4□□□□□ -1.39
SCAF4-204ENST00000467731 NPPAP01160 153 aa6.4□□□□□ -1.39
SCAF4-204ENST00000467731 CD63P08962 238 aa6.4□□□□□ -1.39
SCAF4-204ENST00000467731 ETS2P15036 469 aa6.4□□□□□ -1.39
SCAF4-204ENST00000467731 CFL1P23528 166 aaKnown RBP6.4□□□□□ -1.39
SCAF4-204ENST00000467731 PTPN4P29074 926 aa6.4□□□□□ -1.39
SCAF4-204ENST00000467731 IFNA8P32881 189 aa6.4□□□□□ -1.39
SCAF4-204ENST00000467731 EVI2BP34910 448 aa6.4□□□□□ -1.39
SCAF4-204ENST00000467731 PGDP52209 483 aa6.4□□□□□ -1.39
SCAF4-204ENST00000467731 NCALDP61601 193 aa6.4□□□□□ -1.39
SCAF4-204ENST00000467731 TRMT12Q53H54 448 aaKnown RBP6.4□□□□□ -1.39
SCAF4-204ENST00000467731 ANKRD37Q7Z713 158 aa6.4□□□□□ -1.39
SCAF4-204ENST00000467731 ALDH16A1Q8IZ83 802 aa6.4□□□□□ -1.39
SCAF4-204ENST00000467731 VWA5B2Q8N398 1253 aa6.4□□□□□ -1.39
SCAF4-204ENST00000467731 PTPMT1Q8WUK0 201 aaPredicted RBP6.4□□□□□ -1.39
SCAF4-204ENST00000467731 CTHRC1Q96CG8 243 aa6.4□□□□□ -1.39
SCAF4-204ENST00000467731 ELP4Q96EB1 424 aa6.4□□□□□ -1.39
SCAF4-204ENST00000467731 ZNF578Q96N58 590 aaPredicted RBP6.4□□□□□ -1.39
SCAF4-204ENST00000467731 SLC35A5Q9BS91 424 aa6.4□□□□□ -1.39
SCAF4-204ENST00000467731 ADAP2Q9NPF8 381 aa6.4□□□□□ -1.39
SCAF4-204ENST00000467731 SELENONQ9NZV5 590 aa6.4□□□□□ -1.39
SCAF4-204ENST00000467731 VPS4AQ9UN37 437 aa6.4□□□□□ -1.39
SCAF4-204ENST00000467731 MSRB2Q9Y3D2 182 aa6.4□□□□□ -1.39
SCAF4-204ENST00000467731 CLCA3PQ9Y6N3 262 aa6.4□□□□□ -1.39
SCAF4-204ENST00000467731 CNTRLQ7Z7A1 2325 aa6.4□□□□□ -1.39
SCAF4-204ENST00000467731 ATMQ13315 3056 aa6.4□□□□□ -1.39
SCAF4-204ENST00000467731 BOD1L1Q8NFC6 3051 aa6.4□□□□□ -1.39
SCAF4-204ENST00000467731 TRBV5-3A0A0A0MS03 114 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 RNF103-CHMP3A0A140T963 221 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 SH3PXD2BA1X283 911 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 TRIM64A6NGJ6 449 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 TRIM64BA6NI03 449 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 SNTNA6NMZ2 147 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 C17orf105B2RV13 164 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 UPK1AO00322 258 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 PLOD2O00469 737 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 ATP5HO75947 161 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 ZCCHC18P0CG32 403 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 TNNI3P19429 210 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 M6PRP20645 277 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 SLC6A2P23975 617 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 CBX5P45973 191 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 CCT3P49368 545 aaKnown RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 OR4D2P58180 307 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 MTPNP58546 118 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 MGAT2Q10469 447 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 TP53BP2Q13625 1128 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 ELAVL1Q15717 326 aaKnown RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 SFT2D3Q587I9 215 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 IGSF11Q5DX21 431 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 NANOGP8Q6NSW7 305 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 C8orf82Q6P1X6 216 aaPredicted RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 TMEM205Q6UW68 189 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 ANGPTL8Q6UXH0 198 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 SLC38A6Q8IZM9 456 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 DEFB107AQ8IZN7 70 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 AMER2Q8N7J2 671 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 SVIPQ8NHG7 77 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 DNAJB8Q8NHS0 232 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 PNPT1Q8TCS8 783 aaKnown RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 ZNF675Q8TD23 568 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 ZFP90Q8TF47 636 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 PHF12Q96QT6 1004 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 PELOQ9BRX2 385 aaKnown RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 CNPPD1Q9BV87 410 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 GPR87Q9BY21 358 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 C1orf21Q9H246 121 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 IKZF5Q9H5V7 419 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms