RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 TMEM198Q66K66 360 aa12.54□□□□□ -0.4
SSBP1-206ENST00000467681 OR4F3Q6IEY1 312 aa12.54□□□□□ -0.4
SSBP1-206ENST00000467681 FAM180AQ6UWF9 173 aa12.54□□□□□ -0.4
SSBP1-206ENST00000467681 ACAD11Q709F0 780 aa12.54□□□□□ -0.4
SSBP1-206ENST00000467681 NUP54Q7Z3B4 507 aa12.54□□□□□ -0.4
SSBP1-206ENST00000467681 GALNT11Q8NCW6 608 aa12.54□□□□□ -0.4
SSBP1-206ENST00000467681 PAQR8Q8TEZ7 354 aa12.54□□□□□ -0.4
SSBP1-206ENST00000467681 HOXB13Q92826 284 aaPredicted RBP12.54□□□□□ -0.4
SSBP1-206ENST00000467681 TEX37Q96LM6 180 aa12.54□□□□□ -0.4
SSBP1-206ENST00000467681 TRIM4Q9C037 500 aa12.54□□□□□ -0.4
SSBP1-206ENST00000467681 CLMPQ9H6B4 373 aa12.54□□□□□ -0.4
SSBP1-206ENST00000467681 SDR39U1Q9NRG7 319 aaPredicted RBP12.54□□□□□ -0.4
SSBP1-206ENST00000467681 SIRT3Q9NTG7 399 aaPredicted RBP12.54□□□□□ -0.4
SSBP1-206ENST00000467681 DEPPQ9NTK1 212 aa12.54□□□□□ -0.4
SSBP1-206ENST00000467681 CNIH4Q9P003 139 aa12.54□□□□□ -0.4
SSBP1-206ENST00000467681 BSNQ9UPA5 3926 aa12.54□□□□□ -0.4
SSBP1-206ENST00000467681 DNAJC13O75165 2243 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 ANKRD33BA6NCL7 494 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 RNASET2O00584 256 aaKnown RBP12.53□□□□□ -0.4
SSBP1-206ENST00000467681 DYNC1I1O14576 645 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 TP53I11O14683 189 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 PPM1BO75688 479 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 CBX6O95503 412 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 P04436 131 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 CCL3P10147 92 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 IL12AP29459 219 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 S100A3P33764 101 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 MAP3K8P41279 467 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 CCT3P49368 545 aaKnown RBP12.53□□□□□ -0.4
SSBP1-206ENST00000467681 NME5P56597 212 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 CORO7P57737 925 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 FBXW4P57775 412 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 PSPHP78330 225 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 PSG6Q00889 435 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 GAB1Q13480 694 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 DPY19L1Q2PZI1 675 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 CYP27C1Q4G0S4 372 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 PDCD4Q53EL6 469 aaKnown RBP12.53□□□□□ -0.4
SSBP1-206ENST00000467681 ANXA8L1Q5VT79 327 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 NPSR1Q6W5P4 371 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 SLC44A2Q8IWA5 706 aaPredicted RBP12.53□□□□□ -0.4
SSBP1-206ENST00000467681 PRR22Q8IZ63 422 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 SLC34A3Q8N130 599 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 POGLUT1Q8NBL1 392 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 FAM98AQ8NCA5 519 aaKnown RBP12.53□□□□□ -0.4
SSBP1-206ENST00000467681 FAM13CQ8NE31 585 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 VPS37AQ8NEZ2 397 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 NUP43Q8NFH3 380 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 OR10G3Q8NGC4 313 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 SPPL2AQ8TCT8 520 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 STON2Q8WXE9 905 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 NR4A3Q92570 626 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 OMA1Q96E52 524 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 SECISBP2Q96T21 854 aaKnown RBP12.53□□□□□ -0.4
SSBP1-206ENST00000467681 EBF4Q9BQW3 602 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 LMF2Q9BU23 707 aaKnown RBP12.53□□□□□ -0.4
SSBP1-206ENST00000467681 TCF7L2Q9NQB0 619 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 SACM1LQ9NTJ5 587 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 OLAHQ9NV23 265 aa12.53□□□□□ -0.4
SSBP1-206ENST00000467681 CNOT11Q9UKZ1 510 aaKnown RBP12.53□□□□□ -0.4
SSBP1-206ENST00000467681 CHCHD2Q9Y6H1 151 aaPredicted RBP12.53□□□□□ -0.4
SSBP1-206ENST00000467681 EML6Q6ZMW3 1958 aa12.52□□□□□ -0.4
SSBP1-206ENST00000467681 GTF3C1Q12789 2109 aa12.52□□□□□ -0.4
SSBP1-206ENST00000467681 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 E9PBE3 544 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 CFLARO15519 480 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 REM1O75628 298 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 SLC22A3O75751 556 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 MST1P26927 711 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 GABRA3P34903 492 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 MDH1P40925 334 aaKnown RBP12.52□□□□□ -0.41
SSBP1-206ENST00000467681 MRPL19P49406 292 aaKnown RBP12.52□□□□□ -0.41
SSBP1-206ENST00000467681 TMED10P49755 219 aaKnown RBP12.52□□□□□ -0.41
SSBP1-206ENST00000467681 MEOX1P50221 254 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 PRKAG1P54619 331 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 HBA1P69905 142 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 PRR5P85299 388 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 PMP22Q01453 160 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 GUCY1A3Q02108 690 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 NNATQ16517 81 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 FAM174BQ3ZCQ3 159 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 RNFT1Q5M7Z0 435 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 SPANXN4Q5MJ08 99 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 ZCCHC12Q6PEW1 402 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 ATCAYQ86WG3 371 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 FBXW8Q8N3Y1 598 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 ZFP62Q8NB50 900 aaPredicted RBP12.52□□□□□ -0.41
SSBP1-206ENST00000467681 GLB1L3Q8NCI6 653 aaPredicted RBP12.52□□□□□ -0.41
SSBP1-206ENST00000467681 OR2M7Q8NG81 312 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 OR5M3Q8NGP4 307 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 HGDQ93099 445 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 TMBIM1Q969X1 311 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 FAM120BQ96EK7 910 aaKnown RBP12.52□□□□□ -0.41
SSBP1-206ENST00000467681 GIMAP5Q96F15 307 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 FRMD6Q96NE9 622 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 ZBTB18Q99592 522 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 SLX1AQ9BQ83 275 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 FAM173AQ9BQD7 235 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 CCDC134Q9H6E4 229 aa12.52□□□□□ -0.41
SSBP1-206ENST00000467681 CXorf36Q9H7Y0 433 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms