RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 PLA1AQ53H76 456 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 HSP90AA4PQ58FG1 418 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 WLSQ5T9L3 541 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 RTL6Q6ICC9 239 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 LRRC8BQ6P9F7 803 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 SHQ1Q6PI26 577 aaKnown RBP5□□□□□ -1.61
PTCD3-207ENST00000467273 RANBP10Q6VN20 620 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 LANCL3Q6ZV70 420 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 SERPINA9Q86WD7 417 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 RHOT2Q8IXI1 618 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 FBXW8Q8N3Y1 598 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 CLDN19Q8N6F1 224 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 CSNK1A1LQ8N752 337 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 PSD4Q8NDX1 1056 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 PLPP5Q8NEB5 264 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 OR56A1Q8NGH5 318 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 OR2A1Q8NGT9 310 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 MCOLN3Q8TDD5 553 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 TRAF3IP1Q8TDR0 691 aaPredicted RBP5□□□□□ -1.61
PTCD3-207ENST00000467273 ZFAND2BQ8WV99 257 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 ASZ1Q8WWH4 475 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5□□□□□ -1.61
PTCD3-207ENST00000467273 HTRA1Q92743 480 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 RERGQ96A58 199 aaPredicted RBP5□□□□□ -1.61
PTCD3-207ENST00000467273 RAD51AP1Q96B01 352 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 SARAFQ96BY9 339 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 PPP1R2P1Q96PQ5 205 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 OR1F2PQ96R84 312 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 ACAT2Q9BWD1 397 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 TSSK1BQ9BXA7 367 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 REXO4Q9GZR2 422 aaKnown RBP5□□□□□ -1.61
PTCD3-207ENST00000467273 OBP2BQ9NPH6 170 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 TBCCD1Q9NVR7 557 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 CTTNBP2NLQ9P2B4 639 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 PLAGL1Q9UM63 463 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 CAB39Q9Y376 341 aaPredicted RBP5□□□□□ -1.61
PTCD3-207ENST00000467273 JRKLQ9Y4A0 524 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 ARHGAP21Q5T5U3 1957 aa5□□□□□ -1.61
PTCD3-207ENST00000467273 ZNF407Q9C0G0 2248 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 A0A0A6YYC8 382 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-207ENST00000467273 IGHV3-20A0A0C4DH32 117 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 GOLGA6L10A0A0M3HER8 536 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 LOC102723971A0A1B0GUV8 181 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 AQP12BA6NM10 295 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 HNRNPCL2B2RXH8 293 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 I3L1I5 382 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-207ENST00000467273 HNRNPCL1O60812 293 aaKnown RBP4.99□□□□□ -1.61
PTCD3-207ENST00000467273 GPC4O75487 556 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 PDE9AO76083 593 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 CYP1A2P05177 515 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 FAM157CP0CG43 387 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 KDELR1P24390 212 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 GABRB3P28472 473 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 CEACAM8P31997 349 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-207ENST00000467273 TIMP3P35625 211 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 CYLC1P35663 651 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-207ENST00000467273 ARHGAP25P42331 645 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 XCR1P46094 333 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 ATP5OP48047 213 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 ZNF134P52741 427 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 GEMP55040 296 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 PPIAP62937 165 aaKnown RBP4.99□□□□□ -1.61
PTCD3-207ENST00000467273 CTAG1AP78358 180 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 RUNX1T1Q06455 604 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 GRB7Q14451 532 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 PTPRCAPQ14761 206 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 ABRAXAS2Q15018 415 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 SF3B4Q15427 424 aaKnown RBP eCLIP4.99□□□□□ -1.614e-11■■□□□ 13.3
PTCD3-207ENST00000467273 NSDHLQ15738 373 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 HYAL4Q2M3T9 481 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 MAJINQ3KP22 176 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 CHRFAM7AQ494W8 412 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 SFT2D3Q587I9 215 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 FBXO42Q6P3S6 717 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 TRILQ7L0X0 811 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 ZNF571Q7Z3V5 609 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-207ENST00000467273 KCTD20Q7Z5Y7 419 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 GAS2L3Q86XJ1 694 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 CYP4Z2PQ8N1L4 340 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 FAM109AQ8N4B1 249 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 SPERTQ8NA61 448 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 ATG16L2Q8NAA4 619 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 RELL2Q8NC24 303 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-207ENST00000467273 OR5M9Q8NGP3 310 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 OR51Q1Q8NH59 317 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 POC1BQ8TC44 478 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 MAGEC3Q8TD91 643 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 NAT14Q8WUY8 206 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 TFB1MQ8WVM0 346 aaKnown RBP4.99□□□□□ -1.61
PTCD3-207ENST00000467273 LRRC45Q96CN5 670 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 OXNAD1Q96HP4 312 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-207ENST00000467273 MAELQ96JY0 434 aaKnown RBP4.99□□□□□ -1.61
PTCD3-207ENST00000467273 SPATA13Q96N96 652 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 RUNDC3BQ96NL0 473 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 OR2A5Q96R48 311 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 DPH7Q9BTV6 452 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 SORBS1Q9BX66 1292 aaKnown RBP4.99□□□□□ -1.61
PTCD3-207ENST00000467273 FAM129AQ9BZQ8 928 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 ATG10Q9H0Y0 220 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 HAUS4Q9H6D7 363 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms