RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 SZRD1Q7Z422 152 aa14.8□□□□□ -0.04
GPC1-207ENST00000466624 GPALPP1Q8IXQ4 340 aa14.8□□□□□ -0.04
GPC1-207ENST00000466624 DND1Q8IYX4 353 aaKnown RBP14.8□□□□□ -0.04
GPC1-207ENST00000466624 TAGAPQ8N103 731 aa14.8□□□□□ -0.04
GPC1-207ENST00000466624 RP9Q8TA86 221 aaKnown RBP14.8□□□□□ -0.04
GPC1-207ENST00000466624 THAP3Q8WTV1 239 aaPredicted RBP14.8□□□□□ -0.04
GPC1-207ENST00000466624 NEURL3Q96EH8 262 aa14.8□□□□□ -0.04
GPC1-207ENST00000466624 LRRC37BQ96QE4 947 aa14.8□□□□□ -0.04
GPC1-207ENST00000466624 RASL10BQ96S79 203 aa14.8□□□□□ -0.04
GPC1-207ENST00000466624 PAIP1Q9H074 479 aaKnown RBP14.8□□□□□ -0.04
GPC1-207ENST00000466624 TRIM45Q9H8W5 580 aaPredicted RBP14.8□□□□□ -0.04
GPC1-207ENST00000466624 GPATCH2Q9NW75 528 aa14.8□□□□□ -0.04
GPC1-207ENST00000466624 WWP2O00308 870 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 MAN1A2O60476 641 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 OR2J2O76002 312 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 NKX2-2O95096 273 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 KCNH1O95259 989 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 NADKO95544 446 aaPredicted RBP14.79□□□□□ -0.04
GPC1-207ENST00000466624 ANP32DO95626 131 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 CT45A8P0DMV1 189 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 CT45A9P0DMV2 189 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 MAGEA8P43361 318 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 SSR4P51571 173 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 NR0B1P51843 470 aaKnown RBP14.79□□□□□ -0.04
GPC1-207ENST00000466624 PRKAG1P54619 331 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 NRG3P56975 720 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 PSG6Q00889 435 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 CACNA1BQ00975 2339 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 STX5Q13190 355 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 TP53BP2Q13625 1128 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 CYLC2Q14093 348 aaPredicted RBP14.79□□□□□ -0.04
GPC1-207ENST00000466624 CT45A2Q5DJT8 189 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 C6orf10Q5SRN2 563 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 CDC73Q6P1J9 531 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 OPN5Q6U736 354 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 LINC00696Q6ZRV3 163 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 ZNF621Q6ZSS3 439 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 C6orf120Q7Z4R8 191 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 BEST3Q8N1M1 668 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 OR5AK3PQ8NH89 298 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 C9orf43Q8TAL5 461 aaPredicted RBP14.79□□□□□ -0.04
GPC1-207ENST00000466624 MIPOL1Q8TD10 442 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 HAS2Q92819 552 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 STACQ99469 402 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 SLC35A5Q9BS91 424 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 ACTRT3Q9BYD9 372 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 NXF5Q9H1B4 397 aaKnown RBP14.79□□□□□ -0.04
GPC1-207ENST00000466624 GMEB1Q9Y692 573 aa14.79□□□□□ -0.04
GPC1-207ENST00000466624 KMT2BQ9UMN6 2715 aaPredicted RBP14.78□□□□□ -0.04
GPC1-207ENST00000466624 CAPN14A8MX76 684 aa14.78□□□□□ -0.04
GPC1-207ENST00000466624 KRT75O95678 551 aa14.78□□□□□ -0.04
GPC1-207ENST00000466624 NPPAP01160 153 aa14.78□□□□□ -0.04
GPC1-207ENST00000466624 FAM87AP0C7U9 286 aa14.78□□□□□ -0.04
GPC1-207ENST00000466624 NAGAP17050 411 aa14.78□□□□□ -0.04
GPC1-207ENST00000466624 PRDX6P30041 224 aa14.78□□□□□ -0.04
GPC1-207ENST00000466624 CHI3L1P36222 383 aaPredicted RBP14.78□□□□□ -0.04
GPC1-207ENST00000466624 CASRP41180 1078 aa14.78□□□□□ -0.04
GPC1-207ENST00000466624 TMED10P49755 219 aaKnown RBP14.78□□□□□ -0.04
GPC1-207ENST00000466624 HLCSP50747 726 aa14.78□□□□□ -0.04
GPC1-207ENST00000466624 LASP1Q14847 261 aaKnown RBP14.78□□□□□ -0.04
GPC1-207ENST00000466624 NPSR1Q6W5P4 371 aa14.78□□□□□ -0.04
GPC1-207ENST00000466624 RETREG3Q86VR2 466 aa14.78□□□□□ -0.04
GPC1-207ENST00000466624 SNX32Q86XE0 403 aa14.78□□□□□ -0.04
GPC1-207ENST00000466624 ZFP90Q8TF47 636 aa14.78□□□□□ -0.04
GPC1-207ENST00000466624 SLC35G5Q96KT7 338 aa14.78□□□□□ -0.04
GPC1-207ENST00000466624 UTP23Q9BRU9 249 aaKnown RBP14.78□□□□□ -0.04
GPC1-207ENST00000466624 LIN28AQ9H9Z2 209 aaKnown RBP14.78□□□□□ -0.04
GPC1-207ENST00000466624 Q9N2J8 555 aa14.78□□□□□ -0.04
GPC1-207ENST00000466624 EQTNQ9NQ60 294 aa14.78□□□□□ -0.04
GPC1-207ENST00000466624 DUSP22Q9NRW4 184 aa14.78□□□□□ -0.04
GPC1-207ENST00000466624 SLC6A13Q9NSD5 602 aa14.78□□□□□ -0.04
GPC1-207ENST00000466624 FAF1Q9UNN5 650 aaPredicted RBP14.78□□□□□ -0.04
GPC1-207ENST00000466624 PCDHB14Q9Y5E9 798 aa14.78□□□□□ -0.04
GPC1-207ENST00000466624 CNTRLQ7Z7A1 2325 aa14.77□□□□□ -0.04
GPC1-207ENST00000466624 TRBV5-3A0A0A0MS03 114 aa14.77□□□□□ -0.05
GPC1-207ENST00000466624 OR5H15A6NDH6 313 aa14.77□□□□□ -0.05
GPC1-207ENST00000466624 DUXAA6NLW8 204 aa14.77□□□□□ -0.05
GPC1-207ENST00000466624 FBP2O00757 339 aa14.77□□□□□ -0.05
GPC1-207ENST00000466624 ASNA1O43681 348 aa14.77□□□□□ -0.05
GPC1-207ENST00000466624 ZNF354AO60765 605 aaPredicted RBP14.77□□□□□ -0.05
GPC1-207ENST00000466624 WDPCPO95876 746 aa14.77□□□□□ -0.05
GPC1-207ENST00000466624 GSNP06396 782 aa14.77□□□□□ -0.05
GPC1-207ENST00000466624 ALOX5P09917 674 aa14.77□□□□□ -0.05
GPC1-207ENST00000466624 FBXO45P0C2W1 286 aa14.77□□□□□ -0.05
GPC1-207ENST00000466624 ACP2P11117 423 aa14.77□□□□□ -0.05
GPC1-207ENST00000466624 COX4I1P13073 169 aa14.77□□□□□ -0.05
GPC1-207ENST00000466624 CYB561P49447 251 aa14.77□□□□□ -0.05
GPC1-207ENST00000466624 MAN2A2P49641 1150 aa14.77□□□□□ -0.05
GPC1-207ENST00000466624 CORO7P57737 925 aa14.77□□□□□ -0.05
GPC1-207ENST00000466624 TUBA3CQ13748 450 aa14.77□□□□□ -0.05
GPC1-207ENST00000466624 CYP27C1Q4G0S4 372 aa14.77□□□□□ -0.05
GPC1-207ENST00000466624 LACTB2Q53H82 288 aaPredicted RBP14.77□□□□□ -0.05
GPC1-207ENST00000466624 TUBA3EQ6PEY2 450 aa14.77□□□□□ -0.05
GPC1-207ENST00000466624 LYPD8Q6UX82 237 aa14.77□□□□□ -0.05
GPC1-207ENST00000466624 DLEU7Q6UYE1 221 aa14.77□□□□□ -0.05
GPC1-207ENST00000466624 DNAJC14Q6Y2X3 702 aaPredicted RBP14.77□□□□□ -0.05
GPC1-207ENST00000466624 C16orf47Q6ZP98 133 aaPredicted RBP14.77□□□□□ -0.05
GPC1-207ENST00000466624 TREML1Q86YW5 311 aa14.77□□□□□ -0.05
GPC1-207ENST00000466624 SLC44A2Q8IWA5 706 aaPredicted RBP14.77□□□□□ -0.05
GPC1-207ENST00000466624 SLC34A3Q8N130 599 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms