RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 KRT6CP48668 564 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 GSK3BP49841 420 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 CD300CQ08708 224 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 ZKSCAN8Q15776 578 aaPredicted RBP3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 KIF26BQ2KJY2 2108 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 ADPRMQ3LIE5 342 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 DCAF4L1Q3SXM0 396 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 DNAJC21Q5F1R6 531 aaKnown RBP3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 ZNF506Q5JVG8 444 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 WASH2PQ6VEQ5 465 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 Q8N377 158 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 ARFGAP2Q8N6H7 521 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 MAPK1IP1LQ8NDC0 245 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 C17orf47Q8NEP4 570 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 NFAM1Q8NET5 270 aaPredicted RBP3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 OR52J3Q8NH60 311 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 LHX4Q969G2 390 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 TSGA13Q96PP4 275 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 TTYH2Q9BSA4 534 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 KRTAP2-2Q9BYT5 123 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 TSPY26PQ9H489 355 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 ACTR8Q9H981 624 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 LPAR2Q9HBW0 351 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 AMBNQ9NP70 447 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 FAM114A2Q9NRY5 505 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 GDAP2Q9NXN4 497 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 KLK13Q9UKR3 277 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 FOXJ3Q9UPW0 622 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 GRIN2DO15399 1336 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 A0A1B0GWJ7 208 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 TTC26A0AVF1 554 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 FBLL1A6NHQ2 334 aaKnown RBP3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 IMPA2O14732 288 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 ALOX15BO15296 676 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 CHADO15335 359 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 GUCA1CO95843 209 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 AK1P00568 194 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 CGAP01215 116 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 IGHV3-13P01766 116 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 SERPINB2P05120 415 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 UQCRBP14927 111 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 CYP11B1P15538 503 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 HTR2AP28223 471 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 HPDP32754 393 aaPredicted RBP3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 ACAA2P42765 397 aaKnown RBP3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 RPL34P49207 117 aaKnown RBP3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 RAG2P55895 527 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 TRA2BP62995 288 aaKnown RBP3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 ZP4Q12836 540 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 SNAI3Q3KNW1 292 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 ZNF311Q5JNZ3 666 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 DMKNQ6E0U4 476 aaPredicted RBP3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 PRR5LQ6MZQ0 368 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 ZNF562Q6V9R5 426 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 ZNF841Q6ZN19 808 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 CBWD2Q8IUF1 395 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 SPATA3Q8NHX4 192 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 SELENOMQ8WWX9 145 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 MCHR2Q969V1 340 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 KAT8Q9H7Z6 458 aaKnown RBP3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 COQ10BQ9H8M1 238 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 GNB4Q9HAV0 340 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 CENPMQ9NSP4 180 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 SLC35D1Q9NTN3 355 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 RAI14Q9P0K7 980 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 ATP6V1HQ9UI12 483 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 SH3BGRL2Q9UJC5 107 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 RNF6Q9Y252 685 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 EIF3LQ9Y262 564 aaKnown RBP3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 CARMIL1Q5VZK9 1371 aa3.5□□□□□ -1.85
CDC42BPA-211ENST00000466538 TRBV7-9A0A0J9YWB2 115 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 MFSD2BA6NFX1 497 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 WASHC1A8K0Z3 465 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 MCF2LO15068 1137 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 GALR3O60755 368 aaPredicted RBP3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 PEX11AO75192 247 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 IDH1O75874 414 aaKnown RBP3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 MFN2O95140 757 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 ANXA4P09525 319 aaPredicted RBP3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 THRBP10828 461 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 CYP2F1P24903 491 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 ADRA1AP35348 466 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 BRCC3P46736 316 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 METAP1P53582 386 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 NAPAP54920 295 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 MFAP2P55001 183 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 HAND2P61296 217 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 ZNF85Q03923 595 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 EIF2B1Q14232 305 aaKnown RBP3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 TAF7Q15545 349 aaPredicted RBP3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 CDKN3Q16667 212 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 C17orf58Q2M2W7 97 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 TMEM44Q2T9K0 475 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 CYBRD1Q53TN4 286 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 BEND6Q5SZJ8 279 aaPredicted RBP3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 RIPPLY2Q5TAB7 128 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 RFWD3Q6PCD5 774 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 GPRIN3Q6ZVF9 776 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 LPCAT2Q7L5N7 544 aa3.49□□□□□ -1.85
CDC42BPA-211ENST00000466538 TSEN54Q7Z6J9 526 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms