RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 TNMDQ9H2S6 317 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 TSPY26PQ9H489 355 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 ADGRL4Q9HBW9 690 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 IMPAD1Q9NX62 359 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.25□□□□□ -1.89
LRCH3-211ENST00000466054 RCOR3Q9P2K3 495 aaPredicted RBP3.25□□□□□ -1.89
LRCH3-211ENST00000466054 BCAP29Q9UHQ4 241 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 ZNF107Q9UII5 783 aaPredicted RBP3.25□□□□□ -1.89
LRCH3-211ENST00000466054 ZNF490Q9ULM2 529 aaPredicted RBP3.25□□□□□ -1.89
LRCH3-211ENST00000466054 DHRS7Q9Y394 339 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 RPGRIP1LQ68CZ1 1315 aa3.24□□□□□ -1.89
LRCH3-211ENST00000466054 RNF103-CHMP3A0A140T963 221 aa3.24□□□□□ -1.89
LRCH3-211ENST00000466054 TRABD2BA6NFA1 517 aa3.24□□□□□ -1.89
LRCH3-211ENST00000466054 ZSCAN5CA6NGD5 496 aaPredicted RBP3.24□□□□□ -1.89
LRCH3-211ENST00000466054 RANBP6O60518 1105 aaKnown RBP3.24□□□□□ -1.89
LRCH3-211ENST00000466054 RHBDL1O75783 438 aa3.24□□□□□ -1.89
LRCH3-211ENST00000466054 HOXB7P09629 217 aa3.24□□□□□ -1.89
LRCH3-211ENST00000466054 RALAP11233 206 aa3.24□□□□□ -1.89
LRCH3-211ENST00000466054 PVRP15151 417 aa3.24□□□□□ -1.89
LRCH3-211ENST00000466054 IGFBP5P24593 272 aa3.24□□□□□ -1.89
LRCH3-211ENST00000466054 HERVK_113P63132 956 aa3.24□□□□□ -1.89
LRCH3-211ENST00000466054 ERVK-8P63133 956 aa3.24□□□□□ -1.89
LRCH3-211ENST00000466054 IL9RQ01113 521 aa3.24□□□□□ -1.89
LRCH3-211ENST00000466054 ZNF85Q03923 595 aa3.24□□□□□ -1.89
LRCH3-211ENST00000466054 SNX1Q13596 522 aa3.24□□□□□ -1.89
LRCH3-211ENST00000466054 CDC37Q16543 378 aaPredicted RBP3.24□□□□□ -1.89
LRCH3-211ENST00000466054 ZNF699Q32M78 642 aa3.24□□□□□ -1.89
LRCH3-211ENST00000466054 RAB12Q6IQ22 244 aa3.24□□□□□ -1.89
LRCH3-211ENST00000466054 TATDN1Q6P1N9 297 aa3.24□□□□□ -1.89
LRCH3-211ENST00000466054 WDR88Q6ZMY6 472 aa3.24□□□□□ -1.89
LRCH3-211ENST00000466054 ADGRD2Q7Z7M1 963 aa3.24□□□□□ -1.89
LRCH3-211ENST00000466054 KDM8Q8N371 416 aa3.24□□□□□ -1.89
LRCH3-211ENST00000466054 DQX1Q8TE96 717 aaKnown RBP3.24□□□□□ -1.89
LRCH3-211ENST00000466054 WRAP53Q9BUR4 548 aaKnown RBP3.24□□□□□ -1.89
LRCH3-211ENST00000466054 APOOQ9BUR5 198 aa3.24□□□□□ -1.89
LRCH3-211ENST00000466054 ERVK-6Q9BXR3 956 aa3.24□□□□□ -1.89
LRCH3-211ENST00000466054 ALG9Q9H6U8 611 aa3.24□□□□□ -1.89
LRCH3-211ENST00000466054 ESM1Q9NQ30 184 aa3.24□□□□□ -1.89
LRCH3-211ENST00000466054 NAALAD2Q9Y3Q0 740 aa3.24□□□□□ -1.89
LRCH3-211ENST00000466054 UBE4BO95155 1302 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 A0A0J9YVX5 310 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 LRIT2A6NDA9 550 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 MFSD2BA6NFX1 497 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 SEC22BO75396 215 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 THY1P04216 161 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 FNTAP49354 379 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 HAND2P61296 217 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 NOP14P78316 857 aaKnown RBP3.23□□□□□ -1.89
LRCH3-211ENST00000466054 PDK1Q15118 436 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 PARP6Q2NL67 630 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 LRIT3Q3SXY7 679 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 TIMM50Q3ZCQ8 353 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 SLC22A6Q4U2R8 563 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 MS4A13Q5J8X5 152 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 UTF1Q5T230 341 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 SEL1L2Q5TEA6 688 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 LIPKQ5VXJ0 399 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 OR6B2Q6IFH4 312 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 ADAMTSL5Q6ZMM2 481 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 PAQR9Q6ZVX9 377 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 TSEN54Q7Z6J9 526 aaKnown RBP3.23□□□□□ -1.89
LRCH3-211ENST00000466054 ERICH1Q86X53 443 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 HDDC3Q8N4P3 179 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 MRPL43Q8N983 215 aaKnown RBP3.23□□□□□ -1.89
LRCH3-211ENST00000466054 FNDC8Q8TC99 324 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 VN1R17PQ8TDU5 208 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 C14orf79Q96F83 325 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 PIWIL1Q96J94 861 aaKnown RBP3.23□□□□□ -1.89
LRCH3-211ENST00000466054 NMNAT2Q9BZQ4 307 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 TIGARQ9NQ88 270 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 PRR34Q9NV39 138 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 MBD2Q9UBB5 411 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 RNF115Q9Y4L5 304 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 FKBP7Q9Y680 259 aa3.23□□□□□ -1.89
LRCH3-211ENST00000466054 TRBV7-9A0A0J9YWB2 115 aa3.22□□□□□ -1.89
LRCH3-211ENST00000466054 PHOX2AO14813 284 aa3.22□□□□□ -1.89
LRCH3-211ENST00000466054 TOXO94900 526 aa3.22□□□□□ -1.89
LRCH3-211ENST00000466054 IGSF6O95976 241 aa3.22□□□□□ -1.89
LRCH3-211ENST00000466054 H2AFZP0C0S5 128 aa3.22□□□□□ -1.89
LRCH3-211ENST00000466054 GHRP10912 638 aa3.22□□□□□ -1.89
LRCH3-211ENST00000466054 METAP1P53582 386 aa3.22□□□□□ -1.89
LRCH3-211ENST00000466054 ZNF33BQ06732 778 aa3.22□□□□□ -1.89
LRCH3-211ENST00000466054 PRR5LQ6MZQ0 368 aa3.22□□□□□ -1.89
LRCH3-211ENST00000466054 LEG1Q6P5S2 330 aa3.22□□□□□ -1.89
LRCH3-211ENST00000466054 ELMOD2Q8IZ81 293 aa3.22□□□□□ -1.89
LRCH3-211ENST00000466054 RNF148Q8N7C7 305 aa3.22□□□□□ -1.89
LRCH3-211ENST00000466054 ARL10Q8N8L6 244 aa3.22□□□□□ -1.89
LRCH3-211ENST00000466054 OR8H1Q8NGG4 311 aa3.22□□□□□ -1.89
LRCH3-211ENST00000466054 OR52J3Q8NH60 311 aa3.22□□□□□ -1.89
LRCH3-211ENST00000466054 WDR36Q8NI36 951 aaKnown RBP3.22□□□□□ -1.89
LRCH3-211ENST00000466054 ZPLD1Q8TCW7 415 aa3.22□□□□□ -1.89
LRCH3-211ENST00000466054 TFB1MQ8WVM0 346 aaKnown RBP3.22□□□□□ -1.89
LRCH3-211ENST00000466054 RAB3CQ96E17 227 aa3.22□□□□□ -1.89
LRCH3-211ENST00000466054 CNOT2Q9NZN8 540 aaKnown RBP3.22□□□□□ -1.89
LRCH3-211ENST00000466054 SPASTQ9UBP0 616 aa3.22□□□□□ -1.89
LRCH3-211ENST00000466054 FZR1Q9UM11 496 aa3.22□□□□□ -1.89
LRCH3-211ENST00000466054 PLEKHA6Q9Y2H5 1048 aa3.22□□□□□ -1.89
LRCH3-211ENST00000466054 NTNG1Q9Y2I2 539 aa3.22□□□□□ -1.89
LRCH3-211ENST00000466054 GPRASP1Q5JY77 1395 aa3.22□□□□□ -1.89
LRCH3-211ENST00000466054 IGLV3-10A0A075B6K4 115 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms