RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 VSTM2LQ96N03 204 aa19.93■□□□□ 0.78
LIME1-203ENST00000465591 GNRHR2Q96P88 292 aa19.93■□□□□ 0.78
LIME1-203ENST00000465591 RRAGDQ9NQL2 400 aaPredicted RBP19.93■□□□□ 0.78
LIME1-203ENST00000465591 MID2Q9UJV3 735 aa19.93■□□□□ 0.78
LIME1-203ENST00000465591 ACAD8Q9UKU7 415 aa19.93■□□□□ 0.78
LIME1-203ENST00000465591 DCHS2Q6V1P9 2916 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 C2orf72A6NCS6 295 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 FRG2CA6NGY1 282 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 TMEM233B4DJY2 109 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 ACOX3O15254 700 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 SNX4O95219 450 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 JUNP05412 331 aaKnown RBP19.92■□□□□ 0.78
LIME1-203ENST00000465591 TUBBP07437 444 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 CT45A8P0DMV1 189 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 CT45A9P0DMV2 189 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 PRPH2P23942 346 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 IFFO1Q0D2I5 559 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 CT45A2Q5DJT8 189 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 NUP54Q7Z3B4 507 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 SAMD14Q8IZD0 417 aaPredicted RBP19.92■□□□□ 0.78
LIME1-203ENST00000465591 FAM9CQ8IZT9 166 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 FAM76AQ8TAV0 307 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 TCP10LQ8TDR4 215 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 CA5BP1Q8WTZ4 195 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 RND1Q92730 232 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 TMBIM1Q969X1 311 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 SARAFQ96BY9 339 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 BTBD9Q96Q07 612 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 BBS4Q96RK4 519 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 TTYH2Q9BSA4 534 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 UCK2Q9BZX2 261 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 FOLH1BQ9HBA9 442 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 GALNT9Q9HCQ5 603 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 GIMAP4Q9NUV9 329 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 COQ3Q9NZJ6 369 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 C15orf41Q9Y2V0 281 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 KIAA1549Q9HCM3 1950 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 CSMD1Q96PZ7 3565 aa19.92■□□□□ 0.78
LIME1-203ENST00000465591 NPIPB8E9PQR5 432 aa19.91■□□□□ 0.78
LIME1-203ENST00000465591 GNB5O14775 395 aa19.91■□□□□ 0.78
LIME1-203ENST00000465591 PLOD3O60568 738 aa19.91■□□□□ 0.78
LIME1-203ENST00000465591 SEC22BO75396 215 aa19.91■□□□□ 0.78
LIME1-203ENST00000465591 GLI4P10075 376 aa19.91■□□□□ 0.78
LIME1-203ENST00000465591 COX6B1P14854 86 aa19.91■□□□□ 0.78
LIME1-203ENST00000465591 ARRB2P32121 409 aa19.91■□□□□ 0.78
LIME1-203ENST00000465591 MASP1P48740 699 aa19.91■□□□□ 0.78
LIME1-203ENST00000465591 CDK9P50750 372 aaKnown RBP19.91■□□□□ 0.78
LIME1-203ENST00000465591 DCAF7P61962 342 aa19.91■□□□□ 0.78
LIME1-203ENST00000465591 ERCC6LQ2NKX8 1250 aa19.91■□□□□ 0.78
LIME1-203ENST00000465591 KANK2Q63ZY3 851 aa19.91■□□□□ 0.78
LIME1-203ENST00000465591 ZCCHC23Q6ZST2 131 aa19.91■□□□□ 0.78
LIME1-203ENST00000465591 ERP27Q96DN0 273 aa19.91■□□□□ 0.78
LIME1-203ENST00000465591 TMEM41AQ96HV5 264 aa19.91■□□□□ 0.78
LIME1-203ENST00000465591 ROPN1BQ9BZX4 212 aaPredicted RBP19.91■□□□□ 0.78
LIME1-203ENST00000465591 IQCGQ9H095 443 aaKnown RBP19.91■□□□□ 0.78
LIME1-203ENST00000465591 METTL7AQ9H8H3 244 aa19.91■□□□□ 0.78
LIME1-203ENST00000465591 ROPN1Q9HAT0 212 aaPredicted RBP19.91■□□□□ 0.78
LIME1-203ENST00000465591 LRTM1Q9HBL6 345 aa19.91■□□□□ 0.78
LIME1-203ENST00000465591 TAS2R7Q9NYW3 318 aa19.91■□□□□ 0.78
LIME1-203ENST00000465591 B4GALT7Q9UBV7 327 aa19.91■□□□□ 0.78
LIME1-203ENST00000465591 DNAJC15Q9Y5T4 150 aa19.91■□□□□ 0.78
LIME1-203ENST00000465591 NKX2-6A6NCS4 301 aa19.9■□□□□ 0.78
LIME1-203ENST00000465591 FIGNL2A6NMB9 653 aa19.9■□□□□ 0.78
LIME1-203ENST00000465591 ERN1O75460 977 aaKnown RBP19.9■□□□□ 0.78
LIME1-203ENST00000465591 BCAS2O75934 225 aaPredicted RBP19.9■□□□□ 0.78
LIME1-203ENST00000465591 PTPN6P29350 595 aa19.9■□□□□ 0.78
LIME1-203ENST00000465591 MPIP34949 423 aa19.9■□□□□ 0.78
LIME1-203ENST00000465591 MC3RP41968 323 aa19.9■□□□□ 0.78
LIME1-203ENST00000465591 NCBP2P52298 156 aaKnown RBP eCLIP19.9■□□□□ 0.78
LIME1-203ENST00000465591 RPP38P78345 283 aaKnown RBP19.9■□□□□ 0.78
LIME1-203ENST00000465591 ARL13AQ5H913 290 aaPredicted RBP19.9■□□□□ 0.78
LIME1-203ENST00000465591 WLSQ5T9L3 541 aa19.9■□□□□ 0.78
LIME1-203ENST00000465591 TIGD3Q6B0B8 471 aa19.9■□□□□ 0.78
LIME1-203ENST00000465591 TMEM81Q6P7N7 255 aa19.9■□□□□ 0.78
LIME1-203ENST00000465591 B3GNT6Q6ZMB0 384 aa19.9■□□□□ 0.78
LIME1-203ENST00000465591 PACS2Q86VP3 889 aa19.9■□□□□ 0.78
LIME1-203ENST00000465591 ZNF295-AS1Q8N0V1 137 aa19.9■□□□□ 0.78
LIME1-203ENST00000465591 ACBD4Q8NC06 268 aa19.9■□□□□ 0.78
LIME1-203ENST00000465591 OR4N2Q8NGD1 307 aa19.9■□□□□ 0.78
LIME1-203ENST00000465591 LILRB4Q8NHJ6 448 aa19.9■□□□□ 0.78
LIME1-203ENST00000465591 FCRL1Q96LA6 429 aa19.9■□□□□ 0.78
LIME1-203ENST00000465591 TRMOQ9BU70 441 aa19.9■□□□□ 0.78
LIME1-203ENST00000465591 TRIM8Q9BZR9 551 aa19.9■□□□□ 0.78
LIME1-203ENST00000465591 GLIPR2Q9H4G4 154 aa19.9■□□□□ 0.78
LIME1-203ENST00000465591 MIEF1Q9NQG6 463 aa19.9■□□□□ 0.78
LIME1-203ENST00000465591 C1orf109Q9NX04 203 aa19.9■□□□□ 0.78
LIME1-203ENST00000465591 ALKBH4Q9NXW9 302 aa19.9■□□□□ 0.78
LIME1-203ENST00000465591 FAM90A27PA6NNH2 459 aa19.89■□□□□ 0.77
LIME1-203ENST00000465591 KDM4EB2RXH2 506 aaPredicted RBP19.89■□□□□ 0.77
LIME1-203ENST00000465591 SLC28A1O00337 649 aa19.89■□□□□ 0.77
LIME1-203ENST00000465591 TSPAN2O60636 221 aa19.89■□□□□ 0.77
LIME1-203ENST00000465591 ICOSLGO75144 302 aa19.89■□□□□ 0.77
LIME1-203ENST00000465591 TRAPPC6AO75865 159 aa19.89■□□□□ 0.77
LIME1-203ENST00000465591 HPNP05981 417 aa19.89■□□□□ 0.77
LIME1-203ENST00000465591 LINC00032P0C843 101 aa19.89■□□□□ 0.77
LIME1-203ENST00000465591 CHRNB4P30926 498 aa19.89■□□□□ 0.77
LIME1-203ENST00000465591 ADH7P40394 386 aa19.89■□□□□ 0.77
LIME1-203ENST00000465591 CRYZQ08257 329 aaKnown RBP19.89■□□□□ 0.77
LIME1-203ENST00000465591 UGT3A2Q3SY77 523 aa19.89■□□□□ 0.77
LIME1-203ENST00000465591 EIPR1Q53HC9 387 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms