RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 SLX1AQ9BQ83 275 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 LMF2Q9BU23 707 aaKnown RBP18.72■□□□□ 0.59
SKA3-205ENST00000465471 CCDC28BQ9BUN5 200 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 TCF7L2Q9NQB0 619 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 SDR39U1Q9NRG7 319 aaPredicted RBP18.72■□□□□ 0.59
SKA3-205ENST00000465471 DEPPQ9NTK1 212 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 HELZ2Q9BYK8 2649 aaKnown RBP18.72■□□□□ 0.59
SKA3-205ENST00000465471 EML6Q6ZMW3 1958 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 E9PBE3 544 aa18.71■□□□□ 0.59
SKA3-205ENST00000465471 RNASET2O00584 256 aaKnown RBP18.71■□□□□ 0.59
SKA3-205ENST00000465471 UBDO15205 165 aa18.71■□□□□ 0.59
SKA3-205ENST00000465471 C6orf47O95873 294 aa18.71■□□□□ 0.59
SKA3-205ENST00000465471 CCL3P10147 92 aa18.71■□□□□ 0.59
SKA3-205ENST00000465471 KIR3DL1P43629 444 aa18.71■□□□□ 0.59
SKA3-205ENST00000465471 TMED10P49755 219 aaKnown RBP18.71■□□□□ 0.59
SKA3-205ENST00000465471 PMP22Q01453 160 aa18.71■□□□□ 0.59
SKA3-205ENST00000465471 ZNF155Q12901 538 aaPredicted RBP18.71■□□□□ 0.59
SKA3-205ENST00000465471 RPS6KA2Q15349 733 aa18.71■□□□□ 0.59
SKA3-205ENST00000465471 PGS1Q32NB8 556 aa18.71■□□□□ 0.59
SKA3-205ENST00000465471 SPANXN4Q5MJ08 99 aa18.71■□□□□ 0.59
SKA3-205ENST00000465471 EXOSC6Q5RKV6 272 aaKnown RBP18.71■□□□□ 0.59
SKA3-205ENST00000465471 SULF2Q8IWU5 870 aa18.71■□□□□ 0.59
SKA3-205ENST00000465471 SLC34A3Q8N130 599 aa18.71■□□□□ 0.59
SKA3-205ENST00000465471 BCORP1Q8N888 145 aa18.71■□□□□ 0.59
SKA3-205ENST00000465471 OR10G3Q8NGC4 313 aa18.71■□□□□ 0.59
SKA3-205ENST00000465471 FAM120BQ96EK7 910 aaKnown RBP18.71■□□□□ 0.59
SKA3-205ENST00000465471 MS4A4EQ96PG1 132 aa18.71■□□□□ 0.59
SKA3-205ENST00000465471 CXorf36Q9H7Y0 433 aa18.71■□□□□ 0.59
SKA3-205ENST00000465471 NEUROD4Q9HD90 331 aa18.71■□□□□ 0.59
SKA3-205ENST00000465471 UBR5O95071 2799 aaPredicted RBP18.71■□□□□ 0.59
SKA3-205ENST00000465471 NUP214P35658 2090 aaPredicted RBP18.7■□□□□ 0.58
SKA3-205ENST00000465471 FASNP49327 2511 aaKnown RBP18.7■□□□□ 0.58
SKA3-205ENST00000465471 CAPN14A8MX76 684 aa18.7■□□□□ 0.58
SKA3-205ENST00000465471 POLR3GO15318 223 aaPredicted RBP18.7■□□□□ 0.58
SKA3-205ENST00000465471 EMC8O43402 210 aa18.7■□□□□ 0.58
SKA3-205ENST00000465471 PEX1O43933 1283 aa18.7■□□□□ 0.58
SKA3-205ENST00000465471 PPM1BO75688 479 aa18.7■□□□□ 0.58
SKA3-205ENST00000465471 CRYABP02511 175 aaKnown RBP18.7■□□□□ 0.58
SKA3-205ENST00000465471 ZFP36L2P47974 494 aaKnown RBP18.7■□□□□ 0.58
SKA3-205ENST00000465471 TDGF1P3P51864 188 aa18.7■□□□□ 0.58
SKA3-205ENST00000465471 GUCY1A3Q02108 690 aa18.7■□□□□ 0.58
SKA3-205ENST00000465471 IGFBP7Q16270 282 aa18.7■□□□□ 0.58
SKA3-205ENST00000465471 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.7■□□□□ 0.58
SKA3-205ENST00000465471 PRR22Q8IZ63 422 aa18.7■□□□□ 0.58
SKA3-205ENST00000465471 FBXW8Q8N3Y1 598 aa18.7■□□□□ 0.58
SKA3-205ENST00000465471 ZFP62Q8NB50 900 aaPredicted RBP18.7■□□□□ 0.58
SKA3-205ENST00000465471 FAM98AQ8NCA5 519 aaKnown RBP18.7■□□□□ 0.58
SKA3-205ENST00000465471 GLB1L3Q8NCI6 653 aaPredicted RBP18.7■□□□□ 0.58
SKA3-205ENST00000465471 NTNG2Q96CW9 530 aa18.7■□□□□ 0.58
SKA3-205ENST00000465471 OMA1Q96E52 524 aa18.7■□□□□ 0.58
SKA3-205ENST00000465471 MAGED4Q96JG8 741 aa18.7■□□□□ 0.58
SKA3-205ENST00000465471 MARK4Q96L34 752 aa18.7■□□□□ 0.58
SKA3-205ENST00000465471 SECISBP2Q96T21 854 aaKnown RBP18.7■□□□□ 0.58
SKA3-205ENST00000465471 SIKE1Q9BRV8 207 aa18.7■□□□□ 0.58
SKA3-205ENST00000465471 C3orf14Q9HBI5 128 aa18.7■□□□□ 0.58
SKA3-205ENST00000465471 AGPAT4Q9NRZ5 378 aa18.7■□□□□ 0.58
SKA3-205ENST00000465471 SACM1LQ9NTJ5 587 aa18.7■□□□□ 0.58
SKA3-205ENST00000465471 ZIM2Q9NZV7 527 aa18.7■□□□□ 0.58
SKA3-205ENST00000465471 CNOT11Q9UKZ1 510 aaKnown RBP18.7■□□□□ 0.58
SKA3-205ENST00000465471 A0A0G2JMM0 328 aa18.69■□□□□ 0.58
SKA3-205ENST00000465471 A0A1W2PPB8 328 aa18.69■□□□□ 0.58
SKA3-205ENST00000465471 A0A1W2PRS3 328 aa18.69■□□□□ 0.58
SKA3-205ENST00000465471 TTC36A6NLP5 189 aa18.69■□□□□ 0.58
SKA3-205ENST00000465471 KIR3DP1A8MWS1 328 aa18.69■□□□□ 0.58
SKA3-205ENST00000465471 KLRC4-KLRK1H3BQV0 150 aa18.69■□□□□ 0.58
SKA3-205ENST00000465471 ABCB1P08183 1280 aaPredicted RBP18.69■□□□□ 0.58
SKA3-205ENST00000465471 MEOX1P50221 254 aa18.69■□□□□ 0.58
SKA3-205ENST00000465471 NME5P56597 212 aa18.69■□□□□ 0.58
SKA3-205ENST00000465471 FBXW4P57775 412 aa18.69■□□□□ 0.58
SKA3-205ENST00000465471 HBA1P69905 142 aa18.69■□□□□ 0.58
SKA3-205ENST00000465471 PRR5P85299 388 aa18.69■□□□□ 0.58
SKA3-205ENST00000465471 PLCXD2Q0VAA5 305 aa18.69■□□□□ 0.58
SKA3-205ENST00000465471 FAM174BQ3ZCQ3 159 aa18.69■□□□□ 0.58
SKA3-205ENST00000465471 TMEM81Q6P7N7 255 aa18.69■□□□□ 0.58
SKA3-205ENST00000465471 CLECL1Q8IZS7 167 aa18.69■□□□□ 0.58
SKA3-205ENST00000465471 CPSF7Q8N684 471 aaKnown RBP18.69■□□□□ 0.58
SKA3-205ENST00000465471 POGLUT1Q8NBL1 392 aa18.69■□□□□ 0.58
SKA3-205ENST00000465471 GALNT11Q8NCW6 608 aa18.69■□□□□ 0.58
SKA3-205ENST00000465471 NUP43Q8NFH3 380 aa18.69■□□□□ 0.58
SKA3-205ENST00000465471 SFXN5Q8TD22 340 aa18.69■□□□□ 0.58
SKA3-205ENST00000465471 NR4A3Q92570 626 aa18.69■□□□□ 0.58
SKA3-205ENST00000465471 HGDQ93099 445 aa18.69■□□□□ 0.58
SKA3-205ENST00000465471 SLC35A4Q96G79 324 aa18.69■□□□□ 0.58
SKA3-205ENST00000465471 PROK2Q9HC23 129 aa18.69■□□□□ 0.58
SKA3-205ENST00000465471 OLAHQ9NV23 265 aa18.69■□□□□ 0.58
SKA3-205ENST00000465471 FAM120CQ9NX05 1096 aaKnown RBP18.69■□□□□ 0.58
SKA3-205ENST00000465471 CNIH4Q9P003 139 aa18.69■□□□□ 0.58
SKA3-205ENST00000465471 RELNP78509 3460 aa18.68■□□□□ 0.58
SKA3-205ENST00000465471 PRSS51A0A1B0GVH4 220 aa18.68■□□□□ 0.58
SKA3-205ENST00000465471 PINLYPA6NC86 204 aa18.68■□□□□ 0.58
SKA3-205ENST00000465471 ANKRD33BA6NCL7 494 aa18.68■□□□□ 0.58
SKA3-205ENST00000465471 J3QKU1 62 aa18.68■□□□□ 0.58
SKA3-205ENST00000465471 TSPAN2O60636 221 aa18.68■□□□□ 0.58
SKA3-205ENST00000465471 CNR1P21554 472 aa18.68■□□□□ 0.58
SKA3-205ENST00000465471 MDH1P40925 334 aaKnown RBP18.68■□□□□ 0.58
SKA3-205ENST00000465471 GPR85P60893 370 aa18.68■□□□□ 0.58
SKA3-205ENST00000465471 RNFT1Q5M7Z0 435 aa18.68■□□□□ 0.58
SKA3-205ENST00000465471 ANXA8L1Q5VT79 327 aa18.68■□□□□ 0.58
SKA3-205ENST00000465471 SLC22A10Q63ZE4 541 aa18.68■□□□□ 0.58
SKA3-205ENST00000465471 MFSD12Q6NUT3 480 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms