RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 IGHDP01880 384 aa4.29□□□□□ -1.72
PTCD3-205ENST00000464541 MT-ND3P03897 115 aa4.29□□□□□ -1.72
PTCD3-205ENST00000464541 H2AFZP0C0S5 128 aa4.29□□□□□ -1.72
PTCD3-205ENST00000464541 NPY2RP49146 381 aa4.29□□□□□ -1.72
PTCD3-205ENST00000464541 CCL11P51671 97 aa4.29□□□□□ -1.72
PTCD3-205ENST00000464541 PRKCEQ02156 737 aa4.29□□□□□ -1.72
PTCD3-205ENST00000464541 ACTN3Q08043 901 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-205ENST00000464541 BNIP1Q12981 228 aa4.29□□□□□ -1.72
PTCD3-205ENST00000464541 SLC10A1Q14973 349 aa4.29□□□□□ -1.72
PTCD3-205ENST00000464541 HERC4Q5GLZ8 1057 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-205ENST00000464541 ADAMTSL5Q6ZMM2 481 aa4.29□□□□□ -1.72
PTCD3-205ENST00000464541 GPR137CQ8N3F9 429 aa4.29□□□□□ -1.72
PTCD3-205ENST00000464541 Q8N9G6 341 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-205ENST00000464541 LEMD2Q8NC56 503 aa4.29□□□□□ -1.72
PTCD3-205ENST00000464541 FNDC8Q8TC99 324 aa4.29□□□□□ -1.72
PTCD3-205ENST00000464541 U2AF1L4Q8WU68 220 aaKnown RBP4.29□□□□□ -1.72
PTCD3-205ENST00000464541 KRT35Q92764 455 aa4.29□□□□□ -1.72
PTCD3-205ENST00000464541 N4BP2L2Q92802 583 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-205ENST00000464541 DTD2Q96FN9 168 aa4.29□□□□□ -1.72
PTCD3-205ENST00000464541 HOMER3Q9NSC5 361 aa4.29□□□□□ -1.72
PTCD3-205ENST00000464541 HPF1Q9NWY4 346 aa4.29□□□□□ -1.72
PTCD3-205ENST00000464541 PRODH2Q9UF12 536 aa4.29□□□□□ -1.72
PTCD3-205ENST00000464541 PURGQ9UJV8 347 aaKnown RBP4.29□□□□□ -1.72
PTCD3-205ENST00000464541 CELA1Q9UNI1 258 aa4.29□□□□□ -1.72
PTCD3-205ENST00000464541 TDRKHQ9Y2W6 561 aaKnown RBP4.29□□□□□ -1.72
PTCD3-205ENST00000464541 MTF2Q9Y483 593 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-205ENST00000464541 NPC1L1Q9UHC9 1359 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 KLF18A0A0U1RQI7 1052 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 MFSD2BA6NFX1 497 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 DUSP14O95147 198 aaKnown RBP4.28□□□□□ -1.72
PTCD3-205ENST00000464541 ABHD2P08910 425 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 CT45A10P0DMU9 189 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 HLA-DPA1P20036 260 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 PRKAR2BP31323 418 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 RGRP47804 291 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 NUMBP49757 651 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 METAP1P53582 386 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 HAND2P61296 217 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 HMGN5P82970 282 aaKnown RBP4.28□□□□□ -1.72
PTCD3-205ENST00000464541 ZNF33BQ06732 778 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 AP1B1Q10567 949 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 KIAA0040Q15053 153 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 TGIF1Q15583 401 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 DPY19L2P2Q6ZN68 376 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 PRR22Q8IZ63 422 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 TAF4BQ92750 862 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 LHX4Q969G2 390 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 ZNF560Q96MR9 790 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 CBWD1Q9BRT8 395 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 CARD9Q9H257 536 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 LHX3Q9UBR4 397 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 COPS7AQ9UBW8 275 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 MIOXQ9UGB7 285 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 FAM153AQ9UHL3 310 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 RABL2BQ9UNT1 228 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 KLHDC2Q9Y2U9 406 aa4.28□□□□□ -1.72
PTCD3-205ENST00000464541 DHX29Q7Z478 1369 aaKnown RBP4.27□□□□□ -1.73
PTCD3-205ENST00000464541 NPIPA2E9PIF3 369 aa4.27□□□□□ -1.73
PTCD3-205ENST00000464541 DDX39AO00148 427 aaKnown RBP4.27□□□□□ -1.73
PTCD3-205ENST00000464541 NDC80O14777 642 aa4.27□□□□□ -1.73
PTCD3-205ENST00000464541 LCMT2O60294 686 aaKnown RBP4.27□□□□□ -1.73
PTCD3-205ENST00000464541 RANBP6O60518 1105 aaKnown RBP4.27□□□□□ -1.73
PTCD3-205ENST00000464541 OLFM2O95897 454 aa4.27□□□□□ -1.73
PTCD3-205ENST00000464541 WNT2P09544 360 aa4.27□□□□□ -1.73
PTCD3-205ENST00000464541 GHRP10912 638 aa4.27□□□□□ -1.73
PTCD3-205ENST00000464541 MAGEA4P43358 317 aa4.27□□□□□ -1.73
PTCD3-205ENST00000464541 HNRNPFP52597 415 aaKnown RBP4.27□□□□□ -1.73
PTCD3-205ENST00000464541 NLRP11P59045 1033 aaKnown RBP4.27□□□□□ -1.73
PTCD3-205ENST00000464541 NME3Q13232 169 aa4.27□□□□□ -1.73
PTCD3-205ENST00000464541 LASP1Q14847 261 aaKnown RBP4.27□□□□□ -1.73
PTCD3-205ENST00000464541 ZIC1Q15915 447 aa4.27□□□□□ -1.73
PTCD3-205ENST00000464541 PARP10Q53GL7 1025 aa4.27□□□□□ -1.73
PTCD3-205ENST00000464541 YRDCQ86U90 279 aaKnown RBP4.27□□□□□ -1.73
PTCD3-205ENST00000464541 DLX4Q92988 240 aaPredicted RBP4.27□□□□□ -1.73
PTCD3-205ENST00000464541 TMEM45BQ96B21 275 aa4.27□□□□□ -1.73
PTCD3-205ENST00000464541 FAF2Q96CS3 445 aa4.27□□□□□ -1.73
PTCD3-205ENST00000464541 FTHL17Q9BXU8 183 aa4.27□□□□□ -1.73
PTCD3-205ENST00000464541 NLNQ9BYT8 704 aa4.27□□□□□ -1.73
PTCD3-205ENST00000464541 DPM3Q9P2X0 92 aa4.27□□□□□ -1.73
PTCD3-205ENST00000464541 APPL1Q9UKG1 709 aa4.27□□□□□ -1.73
PTCD3-205ENST00000464541 CLEC4EQ9ULY5 219 aa4.27□□□□□ -1.73
PTCD3-205ENST00000464541 DHRS7Q9Y394 339 aa4.27□□□□□ -1.73
PTCD3-205ENST00000464541 TEX264Q9Y6I9 313 aa4.27□□□□□ -1.73
PTCD3-205ENST00000464541 E7ENQ6 273 aa4.26□□□□□ -1.73
PTCD3-205ENST00000464541 C11orf98E9PRG8 122 aa4.26□□□□□ -1.73
PTCD3-205ENST00000464541 SLC17A2O00624 439 aa4.26□□□□□ -1.73
PTCD3-205ENST00000464541 TNFSF11O14788 317 aa4.26□□□□□ -1.73
PTCD3-205ENST00000464541 HMOX1P09601 288 aa4.26□□□□□ -1.73
PTCD3-205ENST00000464541 TMOD1P28289 359 aa4.26□□□□□ -1.73
PTCD3-205ENST00000464541 CHRNA3P32297 505 aa4.26□□□□□ -1.73
PTCD3-205ENST00000464541 XCR1P46094 333 aa4.26□□□□□ -1.73
PTCD3-205ENST00000464541 SGSHP51688 502 aa4.26□□□□□ -1.73
PTCD3-205ENST00000464541 IL9RQ01113 521 aa4.26□□□□□ -1.73
PTCD3-205ENST00000464541 CD47Q08722 323 aa4.26□□□□□ -1.73
PTCD3-205ENST00000464541 TAF7Q15545 349 aaPredicted RBP4.26□□□□□ -1.73
PTCD3-205ENST00000464541 QRICH1Q2TAL8 776 aa4.26□□□□□ -1.73
PTCD3-205ENST00000464541 HFEQ30201 348 aa4.26□□□□□ -1.73
PTCD3-205ENST00000464541 PAN3Q58A45 887 aaKnown RBP4.26□□□□□ -1.73
PTCD3-205ENST00000464541 LCE3EQ5T5B0 92 aa4.26□□□□□ -1.73
PTCD3-205ENST00000464541 ETFRF1Q6IPR1 90 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms