RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 SSU72Q9NP77 194 aaKnown RBP12.34□□□□□ -0.43
COMMD3-205ENST00000463688 DDX18Q9NVP1 670 aaKnown RBP12.34□□□□□ -0.43
COMMD3-205ENST00000463688 KLRF1Q9NZS2 232 aa12.34□□□□□ -0.43
COMMD3-205ENST00000463688 ENO4A6NNW6 628 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 MYO1GB0I1T2 1018 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 G3V3Y1 287 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 LINC01387J3KSC0 135 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 TM9SF1O15321 606 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 CTIFO43310 598 aaKnown RBP12.33□□□□□ -0.44
COMMD3-205ENST00000463688 TBX19O60806 448 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 ERN1O75460 977 aaKnown RBP12.33□□□□□ -0.44
COMMD3-205ENST00000463688 CLPSP04118 112 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 HPNP05981 417 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 CT62P0C5K7 136 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 LCN1P31025 176 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 HPCAL1P37235 193 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 CDK9P50750 372 aaKnown RBP12.33□□□□□ -0.44
COMMD3-205ENST00000463688 FBXW4P57775 412 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 ADORA2A-AS1P86434 159 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 HSF1Q00613 529 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 MGAT2Q10469 447 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 RCAN2Q14206 197 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 TOMM20Q15388 145 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 DECR1Q16698 335 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 SLC25A35Q3KQZ1 300 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 TCHHL1Q5QJ38 904 aaPredicted RBP12.33□□□□□ -0.44
COMMD3-205ENST00000463688 FAM71E1Q6IPT2 247 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 AAGABQ6PD74 315 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 ZCCHC12Q6PEW1 402 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 TICAM1Q8IUC6 712 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 CHERPQ8IWX8 916 aaKnown RBP12.33□□□□□ -0.44
COMMD3-205ENST00000463688 OR10Q1Q8NGQ4 319 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 CDC26Q8NHZ8 85 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 SLC35A4Q96G79 324 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 GATA5Q9BWX5 397 aaPredicted RBP12.33□□□□□ -0.44
COMMD3-205ENST00000463688 OSBPL11Q9BXB4 747 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 ITPAQ9BY32 194 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 NXF5Q9H1B4 397 aaKnown RBP12.33□□□□□ -0.44
COMMD3-205ENST00000463688 ACBD3Q9H3P7 528 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 ACSS1Q9NUB1 689 aaPredicted RBP12.33□□□□□ -0.44
COMMD3-205ENST00000463688 EDARQ9UNE0 448 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 ABCG2Q9UNQ0 655 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 C15orf41Q9Y2V0 281 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 MRPS18CQ9Y3D5 142 aaKnown RBP12.33□□□□□ -0.44
COMMD3-205ENST00000463688 TRAF6Q9Y4K3 522 aa12.33□□□□□ -0.44
COMMD3-205ENST00000463688 CENPEQ02224 2701 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 C15orf38-AP3S2A0A0A6YYH1 394 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 PRAMEF25A6NGN4 478 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 UBFD1O14562 309 aaKnown RBP12.32□□□□□ -0.44
COMMD3-205ENST00000463688 BIRC5O15392 142 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 ERLIN1O75477 346 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 KCNH1O95259 989 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 CBX7O95931 251 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 KRT16P08779 473 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 CHN1P15882 459 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 CAPN3P20807 821 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 GPC1P35052 558 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 EMDP50402 254 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 RAE1P78406 368 aaKnown RBP12.32□□□□□ -0.44
COMMD3-205ENST00000463688 PRR5P85299 388 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 PMPCAQ10713 525 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 KRT71Q3SY84 523 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 ATP6AP1LQ52LC2 224 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 TRMT12Q53H54 448 aaKnown RBP12.32□□□□□ -0.44
COMMD3-205ENST00000463688 NHSL2Q5HYW2 709 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 C1orf185Q5T7R7 199 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 RIPPLY2Q5TAB7 128 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 BHLHB9Q6PI77 547 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 FAM111BQ6SJ93 734 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 DDIASQ8IXT1 998 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 OR9A2Q8NGT5 310 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 GOT1L1Q8NHS2 421 aaPredicted RBP12.32□□□□□ -0.44
COMMD3-205ENST00000463688 PPCDCQ96CD2 204 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 ZFP3Q96NJ6 502 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 FAM111AQ96PZ2 611 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 EBPLQ9BY08 206 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 REEP4Q9H6H4 257 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 PTGES2Q9H7Z7 377 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 HEY2Q9UBP5 337 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 FOXD3Q9UJU5 478 aaPredicted RBP12.32□□□□□ -0.44
COMMD3-205ENST00000463688 C19orf53Q9UNZ5 99 aaPredicted RBP12.32□□□□□ -0.44
COMMD3-205ENST00000463688 EXO1Q9UQ84 846 aaKnown RBP12.32□□□□□ -0.44
COMMD3-205ENST00000463688 ACTL7BQ9Y614 415 aa12.32□□□□□ -0.44
COMMD3-205ENST00000463688 PINLYPA6NC86 204 aa12.31□□□□□ -0.44
COMMD3-205ENST00000463688 SNPHO15079 494 aa12.31□□□□□ -0.44
COMMD3-205ENST00000463688 PDPK1O15530 556 aa12.31□□□□□ -0.44
COMMD3-205ENST00000463688 ZNF354AO60765 605 aaPredicted RBP12.31□□□□□ -0.44
COMMD3-205ENST00000463688 PRPS2P11908 318 aa12.31□□□□□ -0.44
COMMD3-205ENST00000463688 GRK2P25098 689 aa12.31□□□□□ -0.44
COMMD3-205ENST00000463688 ZFP36L2P47974 494 aaKnown RBP12.31□□□□□ -0.44
COMMD3-205ENST00000463688 HTR6P50406 440 aa12.31□□□□□ -0.44
COMMD3-205ENST00000463688 MANFP55145 182 aaKnown RBP12.31□□□□□ -0.44
COMMD3-205ENST00000463688 EEFSECP57772 596 aaKnown RBP12.31□□□□□ -0.44
COMMD3-205ENST00000463688 GANABQ14697 944 aaKnown RBP12.31□□□□□ -0.44
COMMD3-205ENST00000463688 PCLAFQ15004 111 aa12.31□□□□□ -0.44
COMMD3-205ENST00000463688 EXOSC7Q15024 291 aaKnown RBP12.31□□□□□ -0.44
COMMD3-205ENST00000463688 SMU1Q2TAY7 513 aa12.31□□□□□ -0.44
COMMD3-205ENST00000463688 ARL13AQ5H913 290 aaPredicted RBP12.31□□□□□ -0.44
COMMD3-205ENST00000463688 LARP4Q71RC2 724 aaKnown RBP eCLIP12.31□□□□□ -0.44
COMMD3-205ENST00000463688 FGD2Q7Z6J4 655 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms