RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 BRINP2Q9C0B6 783 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 ALG9Q9H6U8 611 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 EHD3Q9NZN3 535 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 DTX4Q9Y2E6 619 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 EMC8O43402 210 aa13.07□□□□□ -0.32
SMC1A-204ENST00000463684 TLX2O43763 284 aaPredicted RBP13.07□□□□□ -0.32
SMC1A-204ENST00000463684 CD8BP10966 210 aa13.07□□□□□ -0.32
SMC1A-204ENST00000463684 PEPDP12955 493 aa13.07□□□□□ -0.32
SMC1A-204ENST00000463684 CPMP14384 443 aa13.07□□□□□ -0.32
SMC1A-204ENST00000463684 S1PR1P21453 382 aa13.07□□□□□ -0.32
SMC1A-204ENST00000463684 CCKARP32238 428 aa13.07□□□□□ -0.32
SMC1A-204ENST00000463684 HMGCS1Q01581 520 aa13.07□□□□□ -0.32
SMC1A-204ENST00000463684 PDIA2Q13087 525 aaKnown RBP13.07□□□□□ -0.32
SMC1A-204ENST00000463684 ZNF704Q6ZNC4 412 aaPredicted RBP13.07□□□□□ -0.32
SMC1A-204ENST00000463684 HIPK1Q86Z02 1210 aa13.07□□□□□ -0.32
SMC1A-204ENST00000463684 UBQLNLQ8IYU4 475 aa13.07□□□□□ -0.32
SMC1A-204ENST00000463684 ZNF610Q8N9Z0 462 aa13.07□□□□□ -0.32
SMC1A-204ENST00000463684 MAPK1IP1LQ8NDC0 245 aa13.07□□□□□ -0.32
SMC1A-204ENST00000463684 UBXN10Q96LJ8 280 aa13.07□□□□□ -0.32
SMC1A-204ENST00000463684 ITPAQ9BY32 194 aa13.07□□□□□ -0.32
SMC1A-204ENST00000463684 DDX47Q9H0S4 455 aaKnown RBP13.07□□□□□ -0.32
SMC1A-204ENST00000463684 PSD3Q9NYI0 1048 aa13.07□□□□□ -0.32
SMC1A-204ENST00000463684 HEY2Q9UBP5 337 aa13.07□□□□□ -0.32
SMC1A-204ENST00000463684 FBXL2Q9UKC9 423 aa13.07□□□□□ -0.32
SMC1A-204ENST00000463684 PROCRQ9UNN8 238 aa13.07□□□□□ -0.32
SMC1A-204ENST00000463684 UQCRHLA0A096LP55 91 aa13.06□□□□□ -0.32
SMC1A-204ENST00000463684 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.06□□□□□ -0.32
SMC1A-204ENST00000463684 GOLGA6L10A6NI86 522 aa13.06□□□□□ -0.32
SMC1A-204ENST00000463684 H0YIV9 168 aa13.06□□□□□ -0.32
SMC1A-204ENST00000463684 ABCB7O75027 752 aa13.06□□□□□ -0.32
SMC1A-204ENST00000463684 REM1O75628 298 aa13.06□□□□□ -0.32
SMC1A-204ENST00000463684 PIAS1O75925 651 aa13.06□□□□□ -0.32
SMC1A-204ENST00000463684 SOX30O94993 753 aa13.06□□□□□ -0.32
SMC1A-204ENST00000463684 CGAP01215 116 aa13.06□□□□□ -0.32
SMC1A-204ENST00000463684 PPP3CBP16298 524 aa13.06□□□□□ -0.32
SMC1A-204ENST00000463684 DRD5P21918 477 aa13.06□□□□□ -0.32
SMC1A-204ENST00000463684 TCEA1P23193 301 aaKnown RBP13.06□□□□□ -0.32
SMC1A-204ENST00000463684 DPP4P27487 766 aa13.06□□□□□ -0.32
SMC1A-204ENST00000463684 DEKP35659 375 aaKnown RBP13.06□□□□□ -0.32
SMC1A-204ENST00000463684 PPICP45877 212 aa13.06□□□□□ -0.32
SMC1A-204ENST00000463684 NEK2P51955 445 aa13.06□□□□□ -0.32
SMC1A-204ENST00000463684 RAB10P61026 200 aa13.06□□□□□ -0.32
SMC1A-204ENST00000463684 MAP4K2Q12851 820 aa13.06□□□□□ -0.32
SMC1A-204ENST00000463684 CPSF6Q16630 551 aaKnown RBP eCLIP13.06□□□□□ -0.32
SMC1A-204ENST00000463684 OR5M10Q6IEU7 315 aa13.06□□□□□ -0.32
SMC1A-204ENST00000463684 C22orf34Q6ZV56 151 aa13.06□□□□□ -0.32
SMC1A-204ENST00000463684 MILR1Q7Z6M3 343 aa13.06□□□□□ -0.32
SMC1A-204ENST00000463684 ZNF611Q8N823 705 aa13.06□□□□□ -0.32
SMC1A-204ENST00000463684 GBP7Q8N8V2 638 aaPredicted RBP13.06□□□□□ -0.32
SMC1A-204ENST00000463684 UBTD2Q8WUN7 234 aa13.06□□□□□ -0.32
SMC1A-204ENST00000463684 FIG4Q92562 907 aa13.06□□□□□ -0.32
SMC1A-204ENST00000463684 CDKL2Q92772 493 aa13.06□□□□□ -0.32
SMC1A-204ENST00000463684 TRMT61AQ96FX7 289 aaKnown RBP13.06□□□□□ -0.32
SMC1A-204ENST00000463684 COL21A1Q96P44 957 aa13.06□□□□□ -0.32
SMC1A-204ENST00000463684 REG4Q9BYZ8 158 aa13.06□□□□□ -0.32
SMC1A-204ENST00000463684 NMRAL1Q9HBL8 299 aa13.06□□□□□ -0.32
SMC1A-204ENST00000463684 YAE1D1Q9NRH1 226 aa13.06□□□□□ -0.32
SMC1A-204ENST00000463684 A0A087X1B8 175 aa13.05□□□□□ -0.32
SMC1A-204ENST00000463684 FRG2CA6NGY1 282 aa13.05□□□□□ -0.32
SMC1A-204ENST00000463684 OR6C70A6NIJ9 312 aa13.05□□□□□ -0.32
SMC1A-204ENST00000463684 EFCAB8A8MWE9 144 aa13.05□□□□□ -0.32
SMC1A-204ENST00000463684 UBXN8O00124 270 aa13.05□□□□□ -0.32
SMC1A-204ENST00000463684 FOXE1O00358 373 aaPredicted RBP13.05□□□□□ -0.32
SMC1A-204ENST00000463684 HS3ST1O14792 307 aa13.05□□□□□ -0.32
SMC1A-204ENST00000463684 KLF4O43474 513 aa13.05□□□□□ -0.32
SMC1A-204ENST00000463684 ZIC3O60481 467 aa13.05□□□□□ -0.32
SMC1A-204ENST00000463684 TNFRSF21O75509 655 aa13.05□□□□□ -0.32
SMC1A-204ENST00000463684 IDUAP35475 653 aa13.05□□□□□ -0.32
SMC1A-204ENST00000463684 FASTKD3Q14CZ7 662 aaKnown RBP13.05□□□□□ -0.32
SMC1A-204ENST00000463684 EXOSC7Q15024 291 aaKnown RBP13.05□□□□□ -0.32
SMC1A-204ENST00000463684 ETFDHQ16134 617 aa13.05□□□□□ -0.32
SMC1A-204ENST00000463684 EXOC3L2Q2M3D2 409 aa13.05□□□□□ -0.32
SMC1A-204ENST00000463684 PRICKLE4Q2TBC4 344 aa13.05□□□□□ -0.32
SMC1A-204ENST00000463684 C10orf62Q5T681 223 aaPredicted RBP13.05□□□□□ -0.32
SMC1A-204ENST00000463684 FAM111BQ6SJ93 734 aa13.05□□□□□ -0.32
SMC1A-204ENST00000463684 RAPH1Q70E73 1250 aa13.05□□□□□ -0.32
SMC1A-204ENST00000463684 ISCA2Q86U28 154 aa13.05□□□□□ -0.32
SMC1A-204ENST00000463684 OSBPL9Q96SU4 736 aa13.05□□□□□ -0.32
SMC1A-204ENST00000463684 SERPINI1Q99574 410 aa13.05□□□□□ -0.32
SMC1A-204ENST00000463684 GPR22Q99680 433 aa13.05□□□□□ -0.32
SMC1A-204ENST00000463684 CPNE1Q99829 537 aa13.05□□□□□ -0.32
SMC1A-204ENST00000463684 SMYD2Q9NRG4 433 aa13.05□□□□□ -0.32
SMC1A-204ENST00000463684 PRODH2Q9UF12 536 aa13.05□□□□□ -0.32
SMC1A-204ENST00000463684 LAMP3Q9UQV4 416 aa13.05□□□□□ -0.32
SMC1A-204ENST00000463684 CHD3Q12873 2000 aaKnown RBP13.05□□□□□ -0.32
SMC1A-204ENST00000463684 CD5LO43866 347 aa13.04□□□□□ -0.32
SMC1A-204ENST00000463684 UGDHO60701 494 aa13.04□□□□□ -0.32
SMC1A-204ENST00000463684 KERAO60938 352 aa13.04□□□□□ -0.32
SMC1A-204ENST00000463684 GUCY1B2O75343 617 aa13.04□□□□□ -0.32
SMC1A-204ENST00000463684 KLK1P06870 262 aa13.04□□□□□ -0.32
SMC1A-204ENST00000463684 KRT20P35900 424 aa13.04□□□□□ -0.32
SMC1A-204ENST00000463684 DSCR4P56555 118 aaPredicted RBP13.04□□□□□ -0.32
SMC1A-204ENST00000463684 RPS4XP62701 263 aaKnown RBP13.04□□□□□ -0.32
SMC1A-204ENST00000463684 MGAT2Q10469 447 aa13.04□□□□□ -0.32
SMC1A-204ENST00000463684 CHRFAM7AQ494W8 412 aa13.04□□□□□ -0.32
SMC1A-204ENST00000463684 PAGE2Q7Z2X7 111 aa13.04□□□□□ -0.32
SMC1A-204ENST00000463684 TBC1D1Q86TI0 1168 aaPredicted RBP13.04□□□□□ -0.32
SMC1A-204ENST00000463684 ZBED8Q8IZ13 594 aa13.04□□□□□ -0.32
SMC1A-204ENST00000463684 OR4K17Q8NGC6 315 aa13.04□□□□□ -0.32
SMC1A-204ENST00000463684 TMBIM1Q969X1 311 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms