RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 RAB28P51157 221 aa9.31□□□□□ -0.92
PTPRD-207ENST00000463477 CDH12P55289 794 aa9.31□□□□□ -0.92
PTPRD-207ENST00000463477 CSNK1G2P78368 415 aa9.31□□□□□ -0.92
PTPRD-207ENST00000463477 ABATP80404 500 aa9.31□□□□□ -0.92
PTPRD-207ENST00000463477 CFHR1Q03591 330 aa9.31□□□□□ -0.92
PTPRD-207ENST00000463477 PRDX1Q06830 199 aaKnown RBP9.31□□□□□ -0.92
PTPRD-207ENST00000463477 TRA2AQ13595 282 aaKnown RBP eCLIP9.31□□□□□ -0.92
PTPRD-207ENST00000463477 EXOC3L2Q2M3D2 409 aa9.31□□□□□ -0.92
PTPRD-207ENST00000463477 AMZ1Q400G9 498 aa9.31□□□□□ -0.92
PTPRD-207ENST00000463477 NKAIN2Q5VXU1 208 aa9.31□□□□□ -0.92
PTPRD-207ENST00000463477 TMEM71Q6P5X7 295 aa9.31□□□□□ -0.92
PTPRD-207ENST00000463477 CEACAM20Q6UY09 585 aa9.31□□□□□ -0.92
PTPRD-207ENST00000463477 P2RY8Q86VZ1 359 aa9.31□□□□□ -0.92
PTPRD-207ENST00000463477 SLITRK4Q8IW52 837 aa9.31□□□□□ -0.92
PTPRD-207ENST00000463477 TRIM48Q8IWZ4 208 aa9.31□□□□□ -0.92
PTPRD-207ENST00000463477 DNAJC22Q8N4W6 341 aa9.31□□□□□ -0.92
PTPRD-207ENST00000463477 LMNTD1Q8N9Z9 388 aa9.31□□□□□ -0.92
PTPRD-207ENST00000463477 OR4D9Q8NGE8 314 aa9.31□□□□□ -0.92
PTPRD-207ENST00000463477 WDR36Q8NI36 951 aaKnown RBP9.31□□□□□ -0.92
PTPRD-207ENST00000463477 S100ZQ8WXG8 99 aa9.31□□□□□ -0.92
PTPRD-207ENST00000463477 MYDGFQ969H8 173 aa9.31□□□□□ -0.92
PTPRD-207ENST00000463477 AHCYL2Q96HN2 611 aaKnown RBP9.31□□□□□ -0.92
PTPRD-207ENST00000463477 PLEKHA8Q96JA3 519 aa9.31□□□□□ -0.92
PTPRD-207ENST00000463477 F2RL3Q96RI0 385 aa9.31□□□□□ -0.92
PTPRD-207ENST00000463477 STRADBQ9C0K7 418 aa9.31□□□□□ -0.92
PTPRD-207ENST00000463477 MVB12BQ9H7P6 319 aa9.31□□□□□ -0.92
PTPRD-207ENST00000463477 SYNDIG1Q9H7V2 258 aa9.31□□□□□ -0.92
PTPRD-207ENST00000463477 ZNF556Q9HAH1 456 aa9.31□□□□□ -0.92
PTPRD-207ENST00000463477 SIRT3Q9NTG7 399 aaPredicted RBP9.31□□□□□ -0.92
PTPRD-207ENST00000463477 TMEM184CQ9NVA4 438 aa9.31□□□□□ -0.92
PTPRD-207ENST00000463477 CUEDC1Q9NWM3 386 aaPredicted RBP9.31□□□□□ -0.92
PTPRD-207ENST00000463477 ACSL6Q9UKU0 697 aa9.31□□□□□ -0.92
PTPRD-207ENST00000463477 DSPPQ9NZW4 1301 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 A0A0A6YYD5 115 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 A0A1W2PNU3 283 aaPredicted RBP9.3□□□□□ -0.92
PTPRD-207ENST00000463477 SH3D21A4FU49 640 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 CLCA1A8K7I4 914 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 DUX1O43812 170 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 CCNB2O95067 398 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 GADD45GO95257 159 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 OPN1SWP03999 348 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 CDK1P06493 297 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 MLLT3P42568 568 aaPredicted RBP9.3□□□□□ -0.92
PTPRD-207ENST00000463477 TSFMP43897 325 aaKnown RBP9.3□□□□□ -0.92
PTPRD-207ENST00000463477 SERPINB10P48595 397 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 MANFP55145 182 aaKnown RBP9.3□□□□□ -0.92
PTPRD-207ENST00000463477 ZIC1Q15915 447 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 RPE65Q16518 533 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 DGUOKQ16854 277 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 ADPRMQ3LIE5 342 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 OR4C11Q6IEV9 310 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 ZNF770Q6IQ21 691 aaPredicted RBP9.3□□□□□ -0.92
PTPRD-207ENST00000463477 TMEM64Q6YI46 380 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 RAB11FIP2Q7L804 512 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 UBE3DQ7Z6J8 389 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 ZNF761Q86XN6 746 aaPredicted RBP9.3□□□□□ -0.92
PTPRD-207ENST00000463477 LINC01555Q8NAE3 123 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 OR5AK3PQ8NH89 298 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 CREB3L4Q8TEY5 395 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 PHF10Q8WUB8 498 aaKnown RBP9.3□□□□□ -0.92
PTPRD-207ENST00000463477 ZCCHC14Q8WYQ9 949 aaKnown RBP9.3□□□□□ -0.92
PTPRD-207ENST00000463477 SLC46A1Q96NT5 459 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 DACH2Q96NX9 599 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 INSM2Q96T92 566 aaPredicted RBP9.3□□□□□ -0.92
PTPRD-207ENST00000463477 CMKLR1Q99788 373 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 NUDT22Q9BRQ3 303 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 SORBS1Q9BX66 1292 aaKnown RBP9.3□□□□□ -0.92
PTPRD-207ENST00000463477 WDR12Q9GZL7 423 aaKnown RBP9.3□□□□□ -0.92
PTPRD-207ENST00000463477 SEMA6CQ9H3T2 930 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 SLAMF7Q9NQ25 335 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 FBXO8Q9NRD0 319 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 FAIMQ9NVQ4 179 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 GALNT8Q9NY28 637 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 NDOR1Q9UHB4 597 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 ACAD8Q9UKU7 415 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 ZMIZ1Q9ULJ6 1067 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 SATB2Q9UPW6 733 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 COL27A1Q8IZC6 1860 aaPredicted RBP9.3□□□□□ -0.92
PTPRD-207ENST00000463477 USP24Q9UPU5 2620 aa9.3□□□□□ -0.92
PTPRD-207ENST00000463477 IGHV5-10-1A0A0J9YXX1 117 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 C5orf58C9J3I9 102 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 H7BY64 318 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 PLD2O14939 933 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 PRICKLE3O43900 615 aaPredicted RBP9.29□□□□□ -0.92
PTPRD-207ENST00000463477 KDM1AO60341 852 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 MFN2O95140 757 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 ADAP00813 363 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 NDUFS1P28331 727 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 AHRP35869 848 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 UGT2B10P36537 528 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 TGFBR2P37173 567 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 MAP2K4P45985 399 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 OR1E2P47887 323 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 SMIM11AP58511 58 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 GABREP78334 506 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 OCA2Q04671 838 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 GPR18Q14330 331 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 ZNF846Q147U1 533 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 SMN1Q16637 294 aaKnown RBP9.29□□□□□ -0.92
PTPRD-207ENST00000463477 ST3GAL2Q16842 350 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms