RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 DUSP21Q9H596 190 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 AMBNQ9NP70 447 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 ADAP2Q9NPF8 381 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 HCN3Q9P1Z3 774 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 KLHL3Q9UH77 587 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 BLOC1S6Q9UL45 172 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 CLCA2Q9UQC9 943 aa11.99□□□□□ -0.49
VAPB-203ENST00000463370 WDFY3Q8IZQ1 3526 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 IGHV5-51A0A0C4DH38 117 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 ASNA1O43681 348 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 CDC123O75794 336 aaPredicted RBP11.98□□□□□ -0.49
VAPB-203ENST00000463370 INMTO95050 263 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 ATE1O95260 518 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 GPR75O95800 540 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 MYF5P13349 255 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 MAP2K4P45985 399 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 PPM1FP49593 454 aaPredicted RBP11.98□□□□□ -0.49
VAPB-203ENST00000463370 RNF144AP50876 292 aaPredicted RBP11.98□□□□□ -0.49
VAPB-203ENST00000463370 ANXA11P50995 505 aaKnown RBP11.98□□□□□ -0.49
VAPB-203ENST00000463370 RPS6KA3P51812 740 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 MGAT2Q10469 447 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 SYT16Q17RD7 645 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 PRTGQ2VWP7 1150 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 FAM214AQ32MH5 1076 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 PROX2Q3B8N5 592 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 ZNF311Q5JNZ3 666 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 HEPHL1Q6MZM0 1159 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 CDC73Q6P1J9 531 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 TSSK4Q6SA08 328 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 FRRS1Q6ZNA5 592 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 CLIP4Q8N3C7 705 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 DNAAF2Q9NVR5 837 aaKnown RBP11.98□□□□□ -0.49
VAPB-203ENST00000463370 ZNF226Q9NYT6 803 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 A8MVJ9 347 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 LMO7DNF2Z398 122 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 H3BMQ9 156 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 TGFBR3LH3BV60 316 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 CHST10O43529 356 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 FOXS1O43638 330 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 OR10H3O60404 316 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 SEC14L2O76054 403 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 SOX14O95416 240 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 ATP1B1P05026 303 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 NT5EP21589 574 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 CHMP24386 653 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 DCKP27707 260 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 MAGEA8P43361 318 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 EMX1Q04741 257 aaPredicted RBP11.98□□□□□ -0.49
VAPB-203ENST00000463370 PTGES3Q15185 160 aaKnown RBP11.98□□□□□ -0.49
VAPB-203ENST00000463370 PRICKLE4Q2TBC4 344 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 DCST1Q5T197 706 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 MEX3DQ86XN8 651 aaKnown RBP11.98□□□□□ -0.49
VAPB-203ENST00000463370 METTL27Q8N6F8 245 aaPredicted RBP11.98□□□□□ -0.49
VAPB-203ENST00000463370 ZNF540Q8NDQ6 660 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 COG8Q96MW5 612 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 NELL2Q99435 816 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 ZNF556Q9HAH1 456 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 FBXO34Q9NWN3 711 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 MAT2BQ9NZL9 334 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 REV1Q9UBZ9 1251 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 FTSJ1Q9UET6 329 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 C19orf53Q9UNZ5 99 aaPredicted RBP11.98□□□□□ -0.49
VAPB-203ENST00000463370 NTNG1Q9Y2I2 539 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 PCDHGA10Q9Y5H3 936 aa11.98□□□□□ -0.49
VAPB-203ENST00000463370 ARRDC5A6NEK1 342 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 TRMUO75648 421 aaKnown RBP11.97□□□□□ -0.49
VAPB-203ENST00000463370 POU1F1P28069 291 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 ALDH4A1P30038 563 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 GABRA4P48169 554 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 MASP1P48740 699 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 GP2P55259 537 aaKnown RBP11.97□□□□□ -0.49
VAPB-203ENST00000463370 NUP107P57740 925 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 CXCR4P61073 352 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 HNRNPKP61978 463 aaKnown RBP eCLIP11.97□□□□□ -0.49
VAPB-203ENST00000463370 ERV3-1Q14264 604 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 GNA13Q14344 377 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 PGBD2Q6P3X8 592 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 PODNL1Q6PEZ8 512 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 SAMD14Q8IZD0 417 aaPredicted RBP11.97□□□□□ -0.49
VAPB-203ENST00000463370 CAMKK1Q8N5S9 505 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 PIK3R3Q92569 461 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 GPA33Q99795 319 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 PINK1Q9BXM7 581 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 PCED1AQ9H1Q7 454 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 ANKHQ9HCJ1 492 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 PTGFRNQ9P2B2 879 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 A0A0C4DFX4 3053 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 SH3PXD2BA1X283 911 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 LILRA5A6NI73 299 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 FAM20BO75063 409 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 UGT2B17O75795 530 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 PIAS2O75928 621 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 MT-ND2P03891 347 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 ALPPP05187 535 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 GABRB1P18505 474 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 TRHRP34981 398 aaPredicted RBP11.97□□□□□ -0.49
VAPB-203ENST00000463370 CXCL12P48061 93 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 NUDT6P53370 316 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 RAB38P57729 211 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 MVKQ03426 396 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms