RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 ANKRA2Q9H9E1 313 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 ACKR4Q9NPB9 350 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 KLRF1Q9NZS2 232 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 ACAD8Q9UKU7 415 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 RNF6Q9Y252 685 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 FAM215AQ9Y5M1 114 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 FBN2P35556 2912 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 HCFC1P51610 2035 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 APCP25054 2843 aa9.32□□□□□ -0.92
SF3A3-204ENST00000462258 CSMD2Q7Z408 3487 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 C15orf38-AP3S2A0A0A6YYH1 394 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 PRAMEF25A6NGN4 478 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 GNB5O14775 395 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 TO15178 435 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 RGS14O43566 566 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 TRIM13O60858 407 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 COQ9O75208 318 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 UGT2B11O75310 529 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 SPAG7O75391 227 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 SLITRK5O94991 958 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 CHEK2O96017 543 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 JUNP05412 331 aaKnown RBP9.31□□□□□ -0.92
SF3A3-204ENST00000462258 CHRNGP07510 517 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 ELAVL4P26378 380 aaKnown RBP9.31□□□□□ -0.92
SF3A3-204ENST00000462258 CHRNB4P30926 498 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 MPIP34949 423 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 MC3RP41968 323 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 CASP3P42574 277 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 PPICP45877 212 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 TRPC1P48995 793 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 CDK9P50750 372 aaKnown RBP9.31□□□□□ -0.92
SF3A3-204ENST00000462258 NCBP2P52298 156 aaKnown RBP eCLIP9.31□□□□□ -0.92
SF3A3-204ENST00000462258 CORO7P57737 925 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 C2orf80Q0P641 193 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 C1orf185Q5T7R7 199 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 FNDC7Q5VTL7 733 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 DESI1Q6ICB0 168 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 FAM71E1Q6IPT2 247 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 NOXRED1Q6NXP6 359 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 TMEM81Q6P7N7 255 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 TMEM107Q6UX40 140 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 NPSR1Q6W5P4 371 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 RNF165Q6ZSG1 346 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 NUP54Q7Z3B4 507 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 OR7G2Q8NG99 324 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.31□□□□□ -0.92
SF3A3-204ENST00000462258 TMBIM1Q969X1 311 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 METTL2AQ96IZ6 378 aaKnown RBP9.31□□□□□ -0.92
SF3A3-204ENST00000462258 VSTM2LQ96N03 204 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 NODALQ96S42 347 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 MECRQ9BV79 373 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 STMN4Q9H169 189 aaPredicted RBP9.31□□□□□ -0.92
SF3A3-204ENST00000462258 UBQLN3Q9H347 655 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 FOLH1BQ9HBA9 442 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 LRTM1Q9HBL6 345 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 GALNT9Q9HCQ5 603 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 C1orf109Q9NX04 203 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 SLC17A7Q9P2U7 560 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 GPR55Q9Y2T6 319 aaPredicted RBP9.31□□□□□ -0.92
SF3A3-204ENST00000462258 CCL27Q9Y4X3 112 aa9.31□□□□□ -0.92
SF3A3-204ENST00000462258 OR6C70A6NIJ9 312 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 MYO1GB0I1T2 1018 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 TMEM233B4DJY2 109 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 NPIPB8E9PQR5 432 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 SLC28A1O00337 649 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 SNPHO15079 494 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 ZNF500O60304 480 aaPredicted RBP9.3□□□□□ -0.92
SF3A3-204ENST00000462258 NPHS1O60500 1241 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 PLOD3O60568 738 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 SEC22BO75396 215 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 NME6O75414 186 aaPredicted RBP9.3□□□□□ -0.92
SF3A3-204ENST00000462258 ERN1O75460 977 aaKnown RBP9.3□□□□□ -0.92
SF3A3-204ENST00000462258 TRAPPC6AO75865 159 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 HPNP05981 417 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 CT45A8P0DMV1 189 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 CT45A9P0DMV2 189 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 GABRA1P14867 456 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 DRD5P21918 477 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 TACR1P25103 407 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 PTPN6P29350 595 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 IL12BP29460 328 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 ALDH3A1P30838 453 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 KRT20P35900 424 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 PTGDSP41222 190 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 RPL38P63173 70 aaKnown RBP9.3□□□□□ -0.92
SF3A3-204ENST00000462258 PSPHP78330 225 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 CRYZQ08257 329 aaKnown RBP9.3□□□□□ -0.92
SF3A3-204ENST00000462258 PMPCAQ10713 525 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 KIAA0040Q15053 153 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 TOMM20Q15388 145 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 PRSS53Q2L4Q9 553 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 CT45A2Q5DJT8 189 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 TIGD3Q6B0B8 471 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 RTL6Q6ICC9 239 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 SLC30A6Q6NXT4 461 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 ANGPTL8Q6UXH0 198 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 ZCCHC23Q6ZST2 131 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 CCDC71Q8IV32 467 aaPredicted RBP9.3□□□□□ -0.92
SF3A3-204ENST00000462258 MREGQ8N565 214 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 OR1J4Q8NGS1 313 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms