RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 LRRK1Q38SD2 2015 aa17.37■□□□□ 0.37
HPS3-204ENST00000462030 INMT-MINDY4F8WBC2 141 aa17.37■□□□□ 0.37
HPS3-204ENST00000462030 TEX28O15482 410 aa17.37■□□□□ 0.37
HPS3-204ENST00000462030 TMPRSS11DO60235 418 aa17.37■□□□□ 0.37
HPS3-204ENST00000462030 CH25HO95992 272 aa17.37■□□□□ 0.37
HPS3-204ENST00000462030 BUD31P41223 144 aaPredicted RBP17.37■□□□□ 0.37
HPS3-204ENST00000462030 FRKP42685 505 aaPredicted RBP17.37■□□□□ 0.37
HPS3-204ENST00000462030 UBE3AQ05086 875 aa17.37■□□□□ 0.37
HPS3-204ENST00000462030 WASH2PQ6VEQ5 465 aa17.37■□□□□ 0.37
HPS3-204ENST00000462030 CREB3L2Q70SY1 520 aa17.37■□□□□ 0.37
HPS3-204ENST00000462030 DEFB128Q7Z7B8 93 aa17.37■□□□□ 0.37
HPS3-204ENST00000462030 KRT78Q8N1N4 520 aa17.37■□□□□ 0.37
HPS3-204ENST00000462030 SLC37A3Q8NCC5 494 aa17.37■□□□□ 0.37
HPS3-204ENST00000462030 PRRC1Q96M27 445 aa17.37■□□□□ 0.37
HPS3-204ENST00000462030 YIPF4Q9BSR8 244 aa17.37■□□□□ 0.37
HPS3-204ENST00000462030 MS4A8Q9BY19 250 aa17.37■□□□□ 0.37
HPS3-204ENST00000462030 CUEDC1Q9NWM3 386 aaPredicted RBP17.37■□□□□ 0.37
HPS3-204ENST00000462030 STMN3Q9NZ72 180 aa17.37■□□□□ 0.37
HPS3-204ENST00000462030 SLC9A8Q9Y2E8 581 aa17.37■□□□□ 0.37
HPS3-204ENST00000462030 A0A087WUU8 490 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 A0A0G2JN53 185 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 A0A1W2PQ72 361 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 FEZF1A0PJY2 475 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 IRGMA1A4Y4 181 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 TSPAN11A1L157 253 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 ZSCAN5BA6NJL1 495 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 KDM4EB2RXH2 506 aaPredicted RBP17.36■□□□□ 0.37
HPS3-204ENST00000462030 SGK494L7N484 410 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 MEN1O00255 615 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 PI15O43692 258 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 ZNF767PQ75MW2 155 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 AMER3Q8N944 861 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 PPP1R16AQ96I34 528 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 ZDHHC5Q9C0B5 715 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 QRSL1Q9H0R6 528 aaKnown RBP17.36■□□□□ 0.37
HPS3-204ENST00000462030 TEKT2Q9UIF3 430 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 COL4A6Q14031 1691 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 TBX19O60806 448 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 CHRM4P08173 479 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 CDH11P55287 796 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 RIN1Q13671 783 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 VASNQ6EMK4 673 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 PRICKLE2Q7Z3G6 844 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 ZNF547Q8IVP9 402 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 DTX3Q8N9I9 347 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 OR5AR1Q8NGP9 310 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 TTC9Q92623 222 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 AKAP1Q92667 903 aaKnown RBP eCLIP17.36■□□□□ 0.37
HPS3-204ENST00000462030 IL36AQ9UHA7 158 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 TAC3Q9UHF0 121 aa17.36■□□□□ 0.37
HPS3-204ENST00000462030 COL4A3Q01955 1670 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 SNTNA6NMZ2 147 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 TSC22D2O75157 780 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 ELK1P19419 428 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 GSTM3P21266 225 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 WEE1P30291 646 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 UQCRC1P31930 480 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 CA8P35219 290 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 METAP1P53582 386 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 CSTF1Q05048 431 aaKnown RBP17.35■□□□□ 0.37
HPS3-204ENST00000462030 FUT5Q11128 374 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 ZNF805Q5CZA5 627 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 MRGPREQ86SM8 312 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 SLC39A11Q8N1S5 342 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 OR4M2Q8NGB6 313 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 CLIP3Q96DZ5 547 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 MRGPRX3Q96LB0 322 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 TCF20Q9UGU0 1960 aaKnown RBP17.35■□□□□ 0.37
HPS3-204ENST00000462030 FAM170BA6NMN3 283 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 GTPBP1O00178 669 aaKnown RBP17.35■□□□□ 0.37
HPS3-204ENST00000462030 FRS3O43559 492 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 TYRP14679 529 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 ACADLP28330 430 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 SREBF2Q12772 1141 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 MRPL28Q13084 256 aaKnown RBP17.35■□□□□ 0.37
HPS3-204ENST00000462030 LHX8Q68G74 356 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 KIAA1161Q6NSJ0 714 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 LCTLQ6UWM7 567 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 FAM83HQ6ZRV2 1179 aaPredicted RBP17.35■□□□□ 0.37
HPS3-204ENST00000462030 PARS2Q7L3T8 475 aaKnown RBP17.35■□□□□ 0.37
HPS3-204ENST00000462030 AMIGO1Q86WK6 493 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 NR2C2APQ86WQ0 139 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 CCDC28AQ8IWP9 274 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 C9orf62Q8N4C0 152 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 LINC00471Q8N535 108 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 SETD7Q8WTS6 366 aaKnown RBP17.35■□□□□ 0.37
HPS3-204ENST00000462030 FAM46AQ96IP4 442 aaKnown RBP17.35■□□□□ 0.37
HPS3-204ENST00000462030 GLIPR2Q9H4G4 154 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 C11orf49Q9H6J7 331 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 ZCCHC3Q9NUD5 404 aaKnown RBP17.35■□□□□ 0.37
HPS3-204ENST00000462030 ASF1AQ9Y294 204 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 PRKAB1Q9Y478 270 aa17.35■□□□□ 0.37
HPS3-204ENST00000462030 PCYT1BQ9Y5K3 369 aaPredicted RBP17.35■□□□□ 0.37
HPS3-204ENST00000462030 LANCL1O43813 399 aa17.34■□□□□ 0.37
HPS3-204ENST00000462030 NOS1APO75052 506 aaPredicted RBP17.34■□□□□ 0.37
HPS3-204ENST00000462030 PAHP00439 452 aa17.34■□□□□ 0.37
HPS3-204ENST00000462030 HLA-DPB1P04440 258 aa17.34■□□□□ 0.37
HPS3-204ENST00000462030 PTBP1P26599 531 aaKnown RBP eCLIP17.34■□□□□ 0.37
HPS3-204ENST00000462030 PPP2R1BP30154 601 aa17.34■□□□□ 0.37
HPS3-204ENST00000462030 PKLRP30613 574 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms