RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 GIMAP4Q9NUV9 329 aa17.32■□□□□ 0.36
VARS-220ENST00000461874 EHD3Q9NZN3 535 aa17.32■□□□□ 0.36
VARS-220ENST00000461874 GRID1Q9ULK0 1009 aa17.32■□□□□ 0.36
VARS-220ENST00000461874 FRG2CA6NGY1 282 aa17.31■□□□□ 0.36
VARS-220ENST00000461874 AHRRA9YTQ3 701 aa17.31■□□□□ 0.36
VARS-220ENST00000461874 H3BQF6 201 aa17.31■□□□□ 0.36
VARS-220ENST00000461874 GNB5O14775 395 aa17.31■□□□□ 0.36
VARS-220ENST00000461874 UGT2B11O75310 529 aa17.31■□□□□ 0.36
VARS-220ENST00000461874 PTPN6P29350 595 aa17.31■□□□□ 0.36
VARS-220ENST00000461874 PTGDSP41222 190 aa17.31■□□□□ 0.36
VARS-220ENST00000461874 SNTA1Q13424 505 aa17.31■□□□□ 0.36
VARS-220ENST00000461874 SPDYAQ5MJ70 313 aa17.31■□□□□ 0.36
VARS-220ENST00000461874 ANGPTL8Q6UXH0 198 aa17.31■□□□□ 0.36
VARS-220ENST00000461874 FRMD7Q6ZUT3 714 aa17.31■□□□□ 0.36
VARS-220ENST00000461874 SEM1Q6ZVN7 128 aa17.31■□□□□ 0.36
VARS-220ENST00000461874 BTBD9Q96Q07 612 aa17.31■□□□□ 0.36
VARS-220ENST00000461874 SHCBP1LQ9BZQ2 653 aa17.31■□□□□ 0.36
VARS-220ENST00000461874 L2HGDHQ9H9P8 463 aa17.31■□□□□ 0.36
VARS-220ENST00000461874 SMIM23A6NLE4 172 aa17.3■□□□□ 0.36
VARS-220ENST00000461874 ICOSLGO75144 302 aa17.3■□□□□ 0.36
VARS-220ENST00000461874 CT45A8P0DMV1 189 aa17.3■□□□□ 0.36
VARS-220ENST00000461874 CT45A9P0DMV2 189 aa17.3■□□□□ 0.36
VARS-220ENST00000461874 DDCP20711 480 aa17.3■□□□□ 0.36
VARS-220ENST00000461874 CAPN3P20807 821 aa17.3■□□□□ 0.36
VARS-220ENST00000461874 ZNF763Q0D2J5 394 aa17.3■□□□□ 0.36
VARS-220ENST00000461874 SLC25A35Q3KQZ1 300 aa17.3■□□□□ 0.36
VARS-220ENST00000461874 ACSF3Q4G176 576 aaPredicted RBP17.3■□□□□ 0.36
VARS-220ENST00000461874 EIPR1Q53HC9 387 aa17.3■□□□□ 0.36
VARS-220ENST00000461874 CT45A2Q5DJT8 189 aa17.3■□□□□ 0.36
VARS-220ENST00000461874 NHSL2Q5HYW2 709 aa17.3■□□□□ 0.36
VARS-220ENST00000461874 CFAP157Q5JU67 520 aa17.3■□□□□ 0.36
VARS-220ENST00000461874 VASNQ6EMK4 673 aa17.3■□□□□ 0.36
VARS-220ENST00000461874 TRIM46Q7Z4K8 759 aa17.3■□□□□ 0.36
VARS-220ENST00000461874 OR1J4Q8NGS1 313 aa17.3■□□□□ 0.36
VARS-220ENST00000461874 RDH11Q8TC12 318 aa17.3■□□□□ 0.36
VARS-220ENST00000461874 TMBIM1Q969X1 311 aa17.3■□□□□ 0.36
VARS-220ENST00000461874 OSBPL11Q9BXB4 747 aa17.3■□□□□ 0.36
VARS-220ENST00000461874 PRDM14Q9GZV8 571 aa17.3■□□□□ 0.36
VARS-220ENST00000461874 C12orf65Q9H3J6 166 aaKnown RBP17.3■□□□□ 0.36
VARS-220ENST00000461874 OXSMQ9NWU1 459 aa17.3■□□□□ 0.36
VARS-220ENST00000461874 SLC6A5Q9Y345 797 aa17.3■□□□□ 0.36
VARS-220ENST00000461874 FREM3P0C091 2139 aa17.3■□□□□ 0.36
VARS-220ENST00000461874 HCFC1P51610 2035 aa17.3■□□□□ 0.36
VARS-220ENST00000461874 SPG11Q96JI7 2443 aa17.29■□□□□ 0.36
VARS-220ENST00000461874 OR6C70A6NIJ9 312 aa17.29■□□□□ 0.36
VARS-220ENST00000461874 SNPHO15079 494 aa17.29■□□□□ 0.36
VARS-220ENST00000461874 PLOD3O60568 738 aa17.29■□□□□ 0.36
VARS-220ENST00000461874 CRCPO75575 148 aa17.29■□□□□ 0.36
VARS-220ENST00000461874 EPPINO95925 133 aa17.29■□□□□ 0.36
VARS-220ENST00000461874 CPA3P15088 417 aa17.29■□□□□ 0.36
VARS-220ENST00000461874 BMP7P18075 431 aa17.29■□□□□ 0.36
VARS-220ENST00000461874 MPIP34949 423 aa17.29■□□□□ 0.36
VARS-220ENST00000461874 C2orf80Q0P641 193 aa17.29■□□□□ 0.36
VARS-220ENST00000461874 TOMM20Q15388 145 aa17.29■□□□□ 0.36
VARS-220ENST00000461874 IMPG1Q17R60 797 aa17.29■□□□□ 0.36
VARS-220ENST00000461874 PRSS53Q2L4Q9 553 aa17.29■□□□□ 0.36
VARS-220ENST00000461874 ERCC6LQ2NKX8 1250 aa17.29■□□□□ 0.36
VARS-220ENST00000461874 WIPI1Q5MNZ9 446 aaPredicted RBP17.29■□□□□ 0.36
VARS-220ENST00000461874 PM20D2Q8IYS1 436 aa17.29■□□□□ 0.36
VARS-220ENST00000461874 FAM9CQ8IZT9 166 aa17.29■□□□□ 0.36
VARS-220ENST00000461874 CLYBLQ8N0X4 340 aa17.29■□□□□ 0.36
VARS-220ENST00000461874 FAM76AQ8TAV0 307 aa17.29■□□□□ 0.36
VARS-220ENST00000461874 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.29■□□□□ 0.36
VARS-220ENST00000461874 EPS8L3Q8TE67 593 aaKnown RBP17.29■□□□□ 0.36
VARS-220ENST00000461874 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.29■□□□□ 0.36
VARS-220ENST00000461874 VSTM2LQ96N03 204 aa17.29■□□□□ 0.36
VARS-220ENST00000461874 COL21A1Q96P44 957 aa17.29■□□□□ 0.36
VARS-220ENST00000461874 BBS4Q96RK4 519 aa17.29■□□□□ 0.36
VARS-220ENST00000461874 GALNT9Q9HCQ5 603 aa17.29■□□□□ 0.36
VARS-220ENST00000461874 TNFRSF12AQ9NP84 129 aa17.29■□□□□ 0.36
VARS-220ENST00000461874 KLRF1Q9NZS2 232 aa17.29■□□□□ 0.36
VARS-220ENST00000461874 WBP11Q9Y2W2 641 aaKnown RBP17.29■□□□□ 0.36
VARS-220ENST00000461874 C2orf72A6NCS6 295 aa17.28■□□□□ 0.36
VARS-220ENST00000461874 PRAMEF25A6NGN4 478 aa17.28■□□□□ 0.36
VARS-220ENST00000461874 HSPB2A8KAH6 182 aa17.28■□□□□ 0.36
VARS-220ENST00000461874 MYO1GB0I1T2 1018 aa17.28■□□□□ 0.36
VARS-220ENST00000461874 COPEO14579 308 aa17.28■□□□□ 0.36
VARS-220ENST00000461874 ABCB7O75027 752 aa17.28■□□□□ 0.36
VARS-220ENST00000461874 NME6O75414 186 aaPredicted RBP17.28■□□□□ 0.36
VARS-220ENST00000461874 ERN1O75460 977 aaKnown RBP17.28■□□□□ 0.36
VARS-220ENST00000461874 REM1O75628 298 aa17.28■□□□□ 0.36
VARS-220ENST00000461874 KRT4P19013 534 aa17.28■□□□□ 0.36
VARS-220ENST00000461874 CORO7P57737 925 aa17.28■□□□□ 0.36
VARS-220ENST00000461874 HSPB2Q16082 182 aa17.28■□□□□ 0.36
VARS-220ENST00000461874 FAM71E1Q6IPT2 247 aa17.28■□□□□ 0.36
VARS-220ENST00000461874 NPSR1Q6W5P4 371 aa17.28■□□□□ 0.36
VARS-220ENST00000461874 WDR53Q7Z5U6 358 aaPredicted RBP17.28■□□□□ 0.36
VARS-220ENST00000461874 YRDCQ86U90 279 aaKnown RBP17.28■□□□□ 0.36
VARS-220ENST00000461874 WDSUB1Q8N9V3 476 aa17.28■□□□□ 0.36
VARS-220ENST00000461874 CCDC63Q8NA47 563 aa17.28■□□□□ 0.36
VARS-220ENST00000461874 FAM83FQ8NEG4 500 aaPredicted RBP17.28■□□□□ 0.36
VARS-220ENST00000461874 OR7G2Q8NG99 324 aa17.28■□□□□ 0.36
VARS-220ENST00000461874 TMCO6Q96DC7 493 aa17.28■□□□□ 0.36
VARS-220ENST00000461874 SLC35A4Q96G79 324 aa17.28■□□□□ 0.36
VARS-220ENST00000461874 UGT2B28Q9BY64 529 aa17.28■□□□□ 0.36
VARS-220ENST00000461874 STMN4Q9H169 189 aaPredicted RBP17.28■□□□□ 0.36
VARS-220ENST00000461874 FOLH1BQ9HBA9 442 aa17.28■□□□□ 0.36
VARS-220ENST00000461874 RRAGDQ9NQL2 400 aaPredicted RBP17.28■□□□□ 0.36
VARS-220ENST00000461874 TAS2R7Q9NYW3 318 aa17.28■□□□□ 0.36
VARS-220ENST00000461874 KCNN3Q9UGI6 736 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms