RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 PRAMEF25A6NGN4 478 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 FRG2CA6NGY1 282 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 H0Y3Z8 333 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 SLC28A1O00337 649 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 SEC22BO75396 215 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 ERN1O75460 977 aaKnown RBP8.12□□□□□ -1.11
LDB1-203ENST00000461873 SASH3O75995 380 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 SLITRK5O94991 958 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 ACTL6AO96019 429 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 ABCB1P08183 1280 aaPredicted RBP8.12□□□□□ -1.11
LDB1-203ENST00000461873 RFPL3SP0C7P2 107 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 CPA3P15088 417 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 PCSK2P16519 638 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 KRT4P19013 534 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 BMP5P22003 454 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 MSX1P28360 303 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 KIR2DL3P43628 341 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 CDK9P50750 372 aaKnown RBP8.12□□□□□ -1.11
LDB1-203ENST00000461873 DGKQP52824 942 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 NAGLUP54802 743 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 MRPS35P82673 323 aaKnown RBP8.12□□□□□ -1.11
LDB1-203ENST00000461873 CASP8Q14790 479 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 EMC4Q5J8M3 183 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 TCHHL1Q5QJ38 904 aaPredicted RBP8.12□□□□□ -1.11
LDB1-203ENST00000461873 TIGD3Q6B0B8 471 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 FAM180BQ6P0A1 224 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 LYPD8Q6UX82 237 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 ZYG11AQ6WRX3 759 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 LARP4Q71RC2 724 aaKnown RBP eCLIP8.12□□□□□ -1.11
LDB1-203ENST00000461873 SZRD1Q7Z422 152 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 P4HA3Q7Z4N8 544 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 IFNEQ86WN2 208 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 KIF18BQ86Y91 864 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 ULK2Q8IYT8 1036 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 MARVELD2Q8N4S9 558 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 ZNF441Q8N8Z8 693 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 OR4K17Q8NGC6 315 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 OR9A2Q8NGT5 310 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 OR2W6PQ8NHA6 318 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 GOT1L1Q8NHS2 421 aaPredicted RBP8.12□□□□□ -1.11
LDB1-203ENST00000461873 ZFP28Q8NHY6 868 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 ZNF675Q8TD23 568 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 C16orf78Q8WTQ4 265 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 KAT2AQ92830 837 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 CAVIN3Q969G5 261 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 TMBIM1Q969X1 311 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 TXLNGYQ9BZA5 131 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 ACPTQ9BZG2 426 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 TRIM8Q9BZR9 551 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 ENKD1Q9H0I2 346 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 ACBD3Q9H3P7 528 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 PTGES2Q9H7Z7 377 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 HHATLQ9HCP6 504 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 Q9N2J8 555 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 SH2D2AQ9NP31 389 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 DDX18Q9NVP1 670 aaKnown RBP8.12□□□□□ -1.11
LDB1-203ENST00000461873 EHD3Q9NZN3 535 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 FOXD3Q9UJU5 478 aaPredicted RBP8.12□□□□□ -1.11
LDB1-203ENST00000461873 MAPRE3Q9UPY8 281 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 FIS1Q9Y3D6 152 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 FREM3P0C091 2139 aa8.12□□□□□ -1.11
LDB1-203ENST00000461873 CENPEQ02224 2701 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 INTS1Q8N201 2190 aaKnown RBP8.11□□□□□ -1.11
LDB1-203ENST00000461873 UNC79Q9P2D8 2635 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 A0A0G2JNJ9 132 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 A0A1W2PS29 197 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 OR6C70A6NIJ9 312 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 EEF1E1-BLOC1S5C9J1V9 151 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 EEF1E1O43324 174 aaKnown RBP8.11□□□□□ -1.11
LDB1-203ENST00000461873 ICOSLGO75144 302 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 TRIM3O75382 744 aaPredicted RBP8.11□□□□□ -1.11
LDB1-203ENST00000461873 TOXO94900 526 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 EPPINO95925 133 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 CLPSP04118 112 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 SHBGP04278 402 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 JUNP05412 331 aaKnown RBP8.11□□□□□ -1.11
LDB1-203ENST00000461873 HPNP05981 417 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 UROSP10746 265 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 HPGDP15428 266 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 DDCP20711 480 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 CRHR1P34998 444 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 OPRM1P35372 400 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 TIMP3P35625 211 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 CPA2P48052 419 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 RFX3P48380 749 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 EEFSECP57772 596 aaKnown RBP8.11□□□□□ -1.11
LDB1-203ENST00000461873 EEF1A1P68104 462 aaKnown RBP8.11□□□□□ -1.11
LDB1-203ENST00000461873 SRYQ05066 204 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 CDSNQ15517 529 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 LTB4RQ15722 352 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 DECR1Q16698 335 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 VPS26BQ4G0F5 336 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 TRMT12Q53H54 448 aaKnown RBP8.11□□□□□ -1.11
LDB1-203ENST00000461873 WIPI1Q5MNZ9 446 aaPredicted RBP8.11□□□□□ -1.11
LDB1-203ENST00000461873 EEF1A1P5Q5VTE0 462 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 LIPMQ5VYY2 423 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 BICRALQ6AI39 1079 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 EMBQ6PCB8 327 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 ARSKQ6UWY0 536 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 IKBIPQ70UQ0 350 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms