RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 PSPHP78330 225 aa9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 OCRLQ01968 901 aa9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 UBAP2LQ14157 1087 aaKnown RBP9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 ZNHIT3Q15649 155 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 RNFT1Q5M7Z0 435 aa9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 TBCELQ5QJ74 424 aa9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 PRAMEF20Q5VT98 475 aa9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 BNC2Q6ZN30 1099 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 RGS9BPQ6ZS82 235 aa9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 NUP54Q7Z3B4 507 aa9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 SZRD1Q7Z422 152 aa9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 SLC22A16Q86VW1 577 aa9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 SIAH3Q8IW03 269 aa9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 WDR75Q8IWA0 830 aaKnown RBP9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 SLC44A2Q8IWA5 706 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 LRRC34Q8IZ02 419 aa9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 GHDCQ8N2G8 530 aa9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 CEP70Q8NHQ1 597 aa9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 SPPL2AQ8TCT8 520 aa9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 JSRP1Q96MG2 331 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 VSTM2LQ96N03 204 aa9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 BTBD9Q96Q07 612 aa9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 SECISBP2Q96T21 854 aaKnown RBP9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 TTTY12Q9BZ98 90 aa9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 DPY30Q9C005 99 aa9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 IL1RL2Q9HB29 575 aa9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 ACSS1Q9NUB1 689 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 INTS9Q9NV88 658 aaKnown RBP9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 TUBA8Q9NY65 449 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 CNOT11Q9UKZ1 510 aaKnown RBP9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 BOKQ9UMX3 212 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 GPR55Q9Y2T6 319 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 OR10H1Q9Y4A9 318 aa9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 CHCHD2Q9Y6H1 151 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.74□□□□□ -0.85
TRAPPC12-213ENST00000461577 NINQ8N4C6 2090 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 UPK1AO00322 258 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 SDHDO14521 159 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 TO15178 435 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 CFLARO15519 480 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 EMC8O43402 210 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 NME6O75414 186 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 SASH3O75995 380 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 ABCB1P08183 1280 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 CT45A8P0DMV1 189 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 CT45A9P0DMV2 189 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 LAMP1P11279 417 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 EFNA1P20827 205 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 IL12BP29460 328 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 FRKP42685 505 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 CDK9P50750 372 aaKnown RBP9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 CASP6P55212 293 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 CORO7P57737 925 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 MLC1Q15049 377 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 PGS1Q32NB8 556 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 LSM12Q3MHD2 195 aaKnown RBP9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 CT45A2Q5DJT8 189 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 TMEM198Q66K66 360 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 NXNQ6DKJ4 435 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 PAOXQ6QHF9 649 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 SPATA19Q7Z5L4 167 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 OR2L13Q8N349 312 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 KRTCAP2Q8N6L1 136 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 NUP43Q8NFH3 380 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 PIWIL2Q8TC59 973 aaKnown RBP9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 OR5P2Q8WZ92 322 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 TMBIM1Q969X1 311 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 COL21A1Q96P44 957 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 DOHHQ9BU89 302 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 DUSP26Q9BV47 211 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 BHLHE41Q9C0J9 482 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 DEFB127Q9H1M4 99 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 METTL7AQ9H8H3 244 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 EQTNQ9NQ60 294 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 SLC5A6Q9Y289 635 aa9.73□□□□□ -0.85
TRAPPC12-213ENST00000461577 TRGV8A0A0C4DH27 118 aa9.72□□□□□ -0.85
TRAPPC12-213ENST00000461577 GOLGA8QA0A0J9YX86 632 aa9.72□□□□□ -0.85
TRAPPC12-213ENST00000461577 A0A1B0GUH1 482 aa9.72□□□□□ -0.85
TRAPPC12-213ENST00000461577 GOLGA8OA6NCC3 632 aa9.72□□□□□ -0.85
TRAPPC12-213ENST00000461577 OR6C70A6NIJ9 312 aa9.72□□□□□ -0.85
TRAPPC12-213ENST00000461577 TTC36A6NLP5 189 aa9.72□□□□□ -0.85
TRAPPC12-213ENST00000461577 GOLGA8NF8WBI6 632 aa9.72□□□□□ -0.85
TRAPPC12-213ENST00000461577 ABCB7O75027 752 aa9.72□□□□□ -0.85
TRAPPC12-213ENST00000461577 UGT2B11O75310 529 aa9.72□□□□□ -0.85
TRAPPC12-213ENST00000461577 SEMA7AO75326 666 aa9.72□□□□□ -0.85
TRAPPC12-213ENST00000461577 WISP2O76076 250 aa9.72□□□□□ -0.85
TRAPPC12-213ENST00000461577 PDE9AO76083 593 aa9.72□□□□□ -0.85
TRAPPC12-213ENST00000461577 GLSO94925 669 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC12-213ENST00000461577 ABOP16442 354 aa9.72□□□□□ -0.85
TRAPPC12-213ENST00000461577 MASP1P48740 699 aa9.72□□□□□ -0.85
TRAPPC12-213ENST00000461577 PRIM2P49643 509 aa9.72□□□□□ -0.85
TRAPPC12-213ENST00000461577 DIO3P55073 304 aa9.72□□□□□ -0.85
TRAPPC12-213ENST00000461577 PER3P56645 1201 aa9.72□□□□□ -0.85
TRAPPC12-213ENST00000461577 C21orf58P58505 322 aa9.72□□□□□ -0.85
TRAPPC12-213ENST00000461577 MRPS22P82650 360 aaKnown RBP9.72□□□□□ -0.85
TRAPPC12-213ENST00000461577 PRR5P85299 388 aa9.72□□□□□ -0.85
TRAPPC12-213ENST00000461577 EFR3AQ14156 821 aa9.72□□□□□ -0.85
TRAPPC12-213ENST00000461577 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.72□□□□□ -0.85
TRAPPC12-213ENST00000461577 SPDYE7PQ495Y7 208 aa9.72□□□□□ -0.85
TRAPPC12-213ENST00000461577 C4orf17Q53FE4 359 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms