RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 WNT1P04628 370 aa18.94■□□□□ 0.62
CCM2-203ENST00000461377 CDK1P06493 297 aa18.94■□□□□ 0.62
CCM2-203ENST00000461377 PSMB9P28065 219 aa18.94■□□□□ 0.62
CCM2-203ENST00000461377 STT3AP46977 705 aa18.94■□□□□ 0.62
CCM2-203ENST00000461377 PDX1P52945 283 aa18.94■□□□□ 0.62
CCM2-203ENST00000461377 VSX2P58304 361 aaPredicted RBP18.94■□□□□ 0.62
CCM2-203ENST00000461377 FZD5Q13467 585 aa18.94■□□□□ 0.62
CCM2-203ENST00000461377 FHL5Q5TD97 284 aa18.94■□□□□ 0.62
CCM2-203ENST00000461377 VRK2Q86Y07 508 aa18.94■□□□□ 0.62
CCM2-203ENST00000461377 CA13Q8N1Q1 262 aa18.94■□□□□ 0.62
CCM2-203ENST00000461377 LINC00471Q8N535 108 aa18.94■□□□□ 0.62
CCM2-203ENST00000461377 TMEM52Q8NDY8 209 aa18.94■□□□□ 0.62
CCM2-203ENST00000461377 ZG16BQ96DA0 208 aa18.94■□□□□ 0.62
CCM2-203ENST00000461377 NDOR1Q9UHB4 597 aa18.94■□□□□ 0.62
CCM2-203ENST00000461377 SCN3AQ9NY46 2000 aa18.94■□□□□ 0.62
CCM2-203ENST00000461377 GOLGA4Q13439 2230 aaKnown RBP18.94■□□□□ 0.62
CCM2-203ENST00000461377 KRBA1A5PL33 1030 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 ZBTB11O95625 1053 aaPredicted RBP18.93■□□□□ 0.62
CCM2-203ENST00000461377 BCL10O95999 233 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 ST6GAL1P15907 406 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 POU1F1P28069 291 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 PRKAR1BP31321 381 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 ST13P50502 369 aaKnown RBP18.93■□□□□ 0.62
CCM2-203ENST00000461377 NUDT6P53370 316 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 DCTN2Q13561 401 aaKnown RBP18.93■□□□□ 0.62
CCM2-203ENST00000461377 SPCS2Q15005 226 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 TBCEQ15813 527 aaPredicted RBP18.93■□□□□ 0.62
CCM2-203ENST00000461377 SLX4IPQ5VYV7 408 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 SHISA5Q8N114 240 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 SIMC1Q8NDZ2 872 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 OR5T3Q8NGG3 340 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 TBC1D15Q8TC07 691 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 FCGR1BQ92637 280 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 CDS1Q92903 461 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 CCDC3Q9BQI4 270 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 FAM60AQ9NP50 221 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 AMBNQ9NP70 447 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 C19orf53Q9UNZ5 99 aaPredicted RBP18.93■□□□□ 0.62
CCM2-203ENST00000461377 CHST2Q9Y4C5 530 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 HCRTR1O43613 425 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 FGF17O60258 216 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 ATP1B1P05026 303 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 CD27P26842 260 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 MAZP56270 477 aaKnown RBP18.93■□□□□ 0.62
CCM2-203ENST00000461377 HPCAP84074 193 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 SHC2P98077 582 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 ID2Q02363 134 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 TARDBPQ13148 414 aaKnown RBP eCLIP18.93■□□□□ 0.62
CCM2-203ENST00000461377 LRIT3Q3SXY7 679 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 EXOSC6Q5RKV6 272 aaKnown RBP18.93■□□□□ 0.62
CCM2-203ENST00000461377 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.93■□□□□ 0.62
CCM2-203ENST00000461377 CD300LDQ6UXZ3 194 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 FRRS1Q6ZNA5 592 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 MORN4Q8NDC4 146 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 NR4A3Q92570 626 aa18.93■□□□□ 0.62
CCM2-203ENST00000461377 POLR2J3Q9H1A7 115 aaKnown RBP18.93■□□□□ 0.62
CCM2-203ENST00000461377 A0A1W2PR77 199 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 SH3D21A4FU49 640 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 METTL12A8MUP2 240 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 FCMRO60667 390 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 CSF2P04141 144 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 TP53P04637 393 aaPredicted RBP18.92■□□□□ 0.62
CCM2-203ENST00000461377 LCKP06239 509 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 ACP2P11117 423 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 NR4A1P22736 598 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 C21orf33P30042 268 aaPredicted RBP18.92■□□□□ 0.62
CCM2-203ENST00000461377 ALDH6A1Q02252 535 aaKnown RBP18.92■□□□□ 0.62
CCM2-203ENST00000461377 BNIP3Q12983 259 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 COL9A2Q14055 689 aaPredicted RBP18.92■□□□□ 0.62
CCM2-203ENST00000461377 CCDC85BQ15834 202 aaPredicted RBP18.92■□□□□ 0.62
CCM2-203ENST00000461377 TRMT12Q53H54 448 aaKnown RBP18.92■□□□□ 0.62
CCM2-203ENST00000461377 C12orf73Q69YU5 71 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 PTCHD4Q6ZW05 846 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 ARHGEF39Q8N4T4 335 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 OR4K5Q8NGD3 323 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 GPR83Q9NYM4 423 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 SELENONQ9NZV5 590 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 SLC13A4Q9UKG4 626 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 GPR55Q9Y2T6 319 aaPredicted RBP18.92■□□□□ 0.62
CCM2-203ENST00000461377 A0A087WV62 115 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 TLR4O00206 839 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 LDB3O75112 727 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 SOX14O95416 240 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 GPR75O95800 540 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 IGFBP1P08833 259 aaPredicted RBP18.92■□□□□ 0.62
CCM2-203ENST00000461377 NME1P15531 152 aaKnown RBP18.92■□□□□ 0.62
CCM2-203ENST00000461377 DUSP5Q16690 384 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 NDUFA9Q16795 377 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 INAVAQ3KP66 663 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 ARHGAP11BQ3KRB8 267 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 ZER1Q7Z7L7 766 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 P2RY8Q86VZ1 359 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 DEFB119Q8N690 84 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 C19orf47Q8N9M1 422 aaKnown RBP18.92■□□□□ 0.62
CCM2-203ENST00000461377 OR52P1PQ8NH57 321 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 SLC9A6Q92581 669 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 TRIM45Q9H8W5 580 aaPredicted RBP18.92■□□□□ 0.62
CCM2-203ENST00000461377 C11orf16Q9NQ32 467 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 STARD5Q9NSY2 213 aa18.92■□□□□ 0.62
CCM2-203ENST00000461377 TPST2O60704 377 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms