RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 SCO1O75880 301 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 PIAS2O75928 621 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 KLHL18O94889 574 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 NADKO95544 446 aaPredicted RBP9.78□□□□□ -0.84
HERC4-207ENST00000460168 HRGP04196 525 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 TP53P04637 393 aaPredicted RBP9.78□□□□□ -0.84
HERC4-207ENST00000460168 IL3P08700 152 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 SLC35G6P0C7Q6 338 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 PRG2P13727 222 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 EFNA1P20827 205 aaPredicted RBP9.78□□□□□ -0.84
HERC4-207ENST00000460168 PSMD4P55036 377 aaKnown RBP9.78□□□□□ -0.84
HERC4-207ENST00000460168 CASP9P55211 416 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 EEFSECP57772 596 aaKnown RBP9.78□□□□□ -0.84
HERC4-207ENST00000460168 CSTF1Q05048 431 aaKnown RBP9.78□□□□□ -0.84
HERC4-207ENST00000460168 SRSF5Q13243 272 aaKnown RBP9.78□□□□□ -0.84
HERC4-207ENST00000460168 CLN3Q13286 438 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 LRIF1Q5T3J3 769 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 OR4C11Q6IEV9 310 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 FAM71E1Q6IPT2 247 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 TRIM40Q6P9F5 258 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 FIGLAQ6QHK4 219 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 PRSS42Q7Z5A4 293 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 CAMKMTQ7Z624 323 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 WDR5BQ86VZ2 330 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 C1orf210Q8IVY1 113 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 PRR18Q8N4B5 295 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 ST8SIA2Q92186 375 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 RSC1A1Q92681 617 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 PPCDCQ96CD2 204 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 AURKBQ96GD4 344 aaPredicted RBP9.78□□□□□ -0.84
HERC4-207ENST00000460168 KCNC2Q96PR1 638 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 SLC38A3Q99624 504 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 DOK1Q99704 481 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 SLC6A13Q9NSD5 602 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 SLC25A37Q9NYZ2 338 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 GLTPQ9NZD2 209 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 TP53BP1Q12888 1972 aaPredicted RBP9.78□□□□□ -0.84
HERC4-207ENST00000460168 A0A0J9YY10 115 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 PQLC2LA1A4F0 135 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 TERTO14746 1132 aaKnown RBP9.78□□□□□ -0.84
HERC4-207ENST00000460168 PPM1DO15297 605 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 EIF1BO60739 113 aaKnown RBP9.78□□□□□ -0.84
HERC4-207ENST00000460168 UBXN7O94888 489 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 CPSF4O95639 269 aaKnown RBP9.78□□□□□ -0.84
HERC4-207ENST00000460168 FURINP09958 794 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 EIF1P41567 113 aaKnown RBP9.78□□□□□ -0.84
HERC4-207ENST00000460168 CDKN2CP42773 168 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 ALDH9A1P49189 494 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 ATP12AP54707 1039 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 WNT3P56703 355 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 RAB4BP61018 213 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 STXBP1P61764 594 aaKnown RBP9.78□□□□□ -0.84
HERC4-207ENST00000460168 RGS1Q08116 209 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 HEPACAMQ14CZ8 416 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 SLC5A12Q1EHB4 618 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 DUOXA1Q1HG43 343 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 PMS2CLQ68D20 193 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 C3orf33Q6P1S2 294 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 ZNF621Q6ZSS3 439 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 ZNF438Q7Z4V0 828 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 CLECL1Q8IZS7 167 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 OR2L5Q8NG80 312 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 ZNF420Q8TAQ5 688 aaPredicted RBP9.78□□□□□ -0.84
HERC4-207ENST00000460168 MS4A6EQ96DS6 147 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 KLHL31Q9H511 634 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 LHX9Q9NQ69 397 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 ADAM29Q9UKF5 820 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 EXO1Q9UQ84 846 aaKnown RBP9.78□□□□□ -0.84
HERC4-207ENST00000460168 NEUROG3Q9Y4Z2 214 aa9.78□□□□□ -0.84
HERC4-207ENST00000460168 NCOR1O75376 2440 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 A0A1B0GTW7 788 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 TNFSF14O43557 240 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 NOBOXO60393 691 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 CTSVO60911 334 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 HOXD4P09016 255 aaPredicted RBP9.77□□□□□ -0.85
HERC4-207ENST00000460168 PVRP15151 417 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 UGT2B10P36537 528 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 PPP1CAP62136 330 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 MYBPC1Q00872 1141 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 HYAL2Q12891 473 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 ZIC1Q15915 447 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 INAVAQ3KP66 663 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 ADPRMQ3LIE5 342 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 TOR1AIP1Q5JTV8 583 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.77□□□□□ -0.85
HERC4-207ENST00000460168 TMEM65Q6PI78 240 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 UBE3DQ7Z6J8 389 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 MSRB3Q8IXL7 192 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 OR10A6Q8NH74 314 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 ISOC1Q96CN7 298 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 COQ8BQ96D53 544 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 MTERF3Q96E29 417 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 TEFMQ96QE5 360 aaKnown RBP9.77□□□□□ -0.85
HERC4-207ENST00000460168 ZFYVE21Q9BQ24 234 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 BHLHE41Q9C0J9 482 aaPredicted RBP9.77□□□□□ -0.85
HERC4-207ENST00000460168 TWSG1Q9GZX9 223 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 DDX31Q9H8H2 851 aaKnown RBP9.77□□□□□ -0.85
HERC4-207ENST00000460168 SYNPO2LQ9H987 977 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 UFSP2Q9NUQ7 469 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 PCDHGB4Q9UN71 923 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms