RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 ACP5P13686 325 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 CD53P19397 219 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 S100A1P23297 94 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 TNFSF8P32971 234 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 GRK5P34947 590 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 DRD3P35462 400 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 BCL6P41182 706 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 VIPR2P41587 438 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 TNFRSF4P43489 277 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 SEPHS1P49903 392 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 METAP1P53582 386 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 TPTEP56180 551 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 KIAA1024LP59773 190 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 EFNB1P98172 346 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 RIPPLY1Q0D2K3 151 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 PIN1Q13526 163 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-202ENST00000459727 LASP1Q14847 261 aaKnown RBP8.32□□□□□ -1.08
HDAC3-202ENST00000459727 KIR2DS3Q14952 304 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 SUZ12Q15022 739 aaKnown RBP8.32□□□□□ -1.08
HDAC3-202ENST00000459727 TRAM1Q15629 374 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 SYPL1Q16563 259 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 FAM214AQ32MH5 1076 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 LEXMQ3ZCV2 418 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 CYP27C1Q4G0S4 372 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 TMEM240Q5SV17 173 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 PDZK1Q5T2W1 519 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 DESI1Q6ICB0 168 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 SDE2Q6IQ49 451 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 CDC73Q6P1J9 531 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 ZCCHC12Q6PEW1 402 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 FBXO46Q6PJ61 603 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-202ENST00000459727 CCBE1Q6UXH8 406 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-202ENST00000459727 PRICKLE2Q7Z3G6 844 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 ZER1Q7Z7L7 766 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 IQCHQ86VS3 1027 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 RAB43Q86YS6 212 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 RNF113BQ8IZP6 322 aaKnown RBP8.32□□□□□ -1.08
HDAC3-202ENST00000459727 OR8H2Q8N162 312 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 LRRC25Q8N386 305 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-202ENST00000459727 HDDC3Q8N4P3 179 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 LMNTD1Q8N9Z9 388 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 LINC01555Q8NAE3 123 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 POGLUT1Q8NBL1 392 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 NUP43Q8NFH3 380 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 ZFPM2Q8WW38 1151 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 ACOT12Q8WYK0 555 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 FGF13Q92913 245 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 FAM131CQ96AQ9 280 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 RSPRY1Q96DX4 576 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 SCARF2Q96GP6 870 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-202ENST00000459727 LRRC3BQ96PB8 259 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 OR2M4Q96R27 311 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 INSM2Q96T92 566 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-202ENST00000459727 CNPPD1Q9BV87 410 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 TMEM121BQ9BXQ6 578 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-202ENST00000459727 OR2B2Q9GZK3 357 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 KCNN2Q9H2S1 579 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 FN3KQ9H479 309 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 SERHL2Q9H4I8 314 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 MTHFD2LQ9H903 347 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-202ENST00000459727 PRDM7Q9NQW5 492 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 POLE3Q9NRF9 147 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 INPP5EQ9NRR6 644 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 ASB6Q9NWX5 421 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 FBXW2Q9UKT8 454 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 TMEM5Q9Y2B1 443 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 PCDHGA4Q9Y5G9 962 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 PTPRSQ13332 1948 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 TRDV1A0A1B0GX56 115 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 A0A1W2PR48 441 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 FAM221BA6H8Z2 402 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 MID1O15344 667 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 SEC14L5O43304 696 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 PRICKLE3O43900 615 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-202ENST00000459727 FMO6PO60774 539 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 B4GALT2O60909 372 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 ERAL1O75616 437 aaKnown RBP8.31□□□□□ -1.08
HDAC3-202ENST00000459727 HLA-DPB1P04440 258 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 TP53P04637 393 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-202ENST00000459727 PSMB5P28074 263 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 HTR1FP30939 366 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 GJA4P35212 333 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 OPRD1P41143 372 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 SOX3P41225 446 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 CASP3P42574 277 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 CDH11P55287 796 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 RGS8P57771 180 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-202ENST00000459727 TAS2R43P59537 309 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 TNFRSF17Q02223 184 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 SLC13A2Q13183 592 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 ASAH1Q13510 395 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 LRRC32Q14392 662 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 MANEAQ5SRI9 462 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 ZNF425Q6IV72 752 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 HEPHL1Q6MZM0 1159 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 MZT2BQ6NZ67 158 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 CD200R1LQ6Q8B3 271 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 VITQ6UXI7 678 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 ZNF517Q6ZMY9 492 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-202ENST00000459727 ZNF793Q6ZN11 406 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms