RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 ARMC1Q9NVT9 282 aa5.46□□□□□ -1.54
RNU1-88P-201ENST00000459274 ABI3Q9P2A4 366 aa5.46□□□□□ -1.54
RNU1-88P-201ENST00000459274 RPS6KB2Q9UBS0 482 aa5.46□□□□□ -1.54
RNU1-88P-201ENST00000459274 TEKT2Q9UIF3 430 aa5.46□□□□□ -1.54
RNU1-88P-201ENST00000459274 CES1P1Q9UKY3 287 aa5.46□□□□□ -1.54
RNU1-88P-201ENST00000459274 ERVK-19Q9WJR5 959 aa5.46□□□□□ -1.54
RNU1-88P-201ENST00000459274 SH3GLB1Q9Y371 365 aa5.46□□□□□ -1.54
RNU1-88P-201ENST00000459274 MRPS2Q9Y399 296 aaKnown RBP5.46□□□□□ -1.54
RNU1-88P-201ENST00000459274 PTRH2Q9Y3E5 179 aaKnown RBP5.46□□□□□ -1.54
RNU1-88P-201ENST00000459274 WDR45Q9Y484 360 aa5.46□□□□□ -1.54
RNU1-88P-201ENST00000459274 AK5Q9Y6K8 562 aa5.46□□□□□ -1.54
RNU1-88P-201ENST00000459274 U3KQA8 63 aa5.46□□□□□ -1.54
RNU1-88P-201ENST00000459274 V9GYQ6 96 aa5.46□□□□□ -1.54
RNU1-88P-201ENST00000459274 RANBP2P49792 3224 aaKnown RBP5.46□□□□□ -1.54
RNU1-88P-201ENST00000459274 SEC16AO15027 2179 aa5.46□□□□□ -1.54
RNU1-88P-201ENST00000459274 PCNX2A6NKB5 2137 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 TRBV5-3A0A0A0MS03 114 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 TCRBV3S1A0A5B6 114 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 A8MUI8 341 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 FAM47E-STBD1D6RA91 191 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 G3V2T6 193 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 STMND1H3BQB6 276 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 HMGN4O00479 90 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 SCDO00767 359 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 ACOT8O14734 319 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 CLOCKO15516 846 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 HCRTR1O43613 425 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 TPST1O60507 370 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 REM1O75628 298 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 STK17BO94768 372 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 PRKD3O94806 890 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 TNFSF15O95150 251 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 PGM3O95394 542 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 CD247P20963 164 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 LCN1P31025 176 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 IFNGR2P38484 337 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 NOVA1P51513 510 aaKnown RBP5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 RAD23AP54725 363 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 MRPS35P82673 323 aaKnown RBP5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 INSM1Q01101 510 aaPredicted RBP5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 GAB1Q13480 694 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 CCNIQ14094 377 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 SELPLGQ14242 412 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 SSPNQ14714 243 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 C16orf72Q14CZ0 275 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 EXOSC7Q15024 291 aaKnown RBP5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 ZNF750Q32MQ0 723 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 ARHGAP11BQ3KRB8 267 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 CYP27C1Q4G0S4 372 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 FLYWCH1Q4VC44 716 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 TRMT12Q53H54 448 aaKnown RBP5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 CYBRD1Q53TN4 286 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 SFT2D3Q587I9 215 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 ZNF628Q5EBL2 1059 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 CRB2Q5IJ48 1285 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 MFSD12Q6NUT3 480 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 FAM111BQ6SJ93 734 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 HSDL2Q6YN16 418 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 MED25Q71SY5 747 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 CBLL1Q75N03 491 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 CPEB2Q7Z5Q1 589 aaKnown RBP5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 CALHM3Q86XJ0 350 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 HIPK1Q86Z02 1210 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 ZZZ3Q8IYH5 903 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 ZNF440Q8IYI8 595 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 CACTIN-AS1Q8N1I8 211 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 ZNF619Q8N2I2 560 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 LINC00471Q8N535 108 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 DTWD1Q8N5C7 304 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 HORMAD2Q8N7B1 307 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 ENDOVQ8N8Q3 282 aaKnown RBP5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 ZSCAN1Q8NBB4 408 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 GALNT6Q8NCL4 622 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 ZNF555Q8NEP9 628 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 PRSS33Q8NF86 280 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 OR7G2Q8NG99 324 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 RNF217Q8TC41 542 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 SLC22A8Q8TCC7 542 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 PHF10Q8WUB8 498 aaKnown RBP5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 SLC38A5Q8WUX1 472 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 NUDT8Q8WV74 236 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 OIT3Q8WWZ8 545 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 TMCO6Q96DC7 493 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 HSPBAP1Q96EW2 488 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 DUS3LQ96G46 650 aaKnown RBP5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 VMP1Q96GC9 406 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 TMEM19Q96HH6 336 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 SENP5Q96HI0 755 aaPredicted RBP5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 FBXL20Q96IG2 436 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 ZNF681Q96N22 645 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 COL21A1Q96P44 957 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 GAL3ST4Q96RP7 486 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 FNDC11Q9BVV2 318 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 CHID1Q9BWS9 393 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 PINK1Q9BXM7 581 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 DEFB126Q9BYW3 111 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 VN1R1Q9GZP7 353 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 AICDAQ9GZX7 198 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 SLC26A1Q9H2B4 701 aa5.45□□□□□ -1.54
RNU1-88P-201ENST00000459274 SOX17Q9H6I2 414 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms