RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 ACSF3Q4G176 576 aaPredicted RBP14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 SPIN4Q56A73 249 aa14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 ACSM2BQ68CK6 577 aa14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 LCA5Q86VQ0 697 aa14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 TMEM151AQ8N4L1 468 aa14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 NINJ1Q92982 152 aa14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 CNRIP1Q96F85 164 aaPredicted RBP14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 EBPLQ9BY08 206 aa14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 L2HGDHQ9H9P8 463 aa14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 HEY2Q9UBP5 337 aa14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 MAPRE3Q9UPY8 281 aa14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 DLGAP4Q9Y2H0 992 aa14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 AKAP6Q13023 2319 aa14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 NSD1Q96L73 2696 aaPredicted RBP14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 PRAMEF25A6NGN4 478 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 AHRRA9YTQ3 701 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 CRCPO75575 148 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 IL2RAP01589 272 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 ENO1P06733 434 aaKnown RBP14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 PYGBP11216 843 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 NAGAP17050 411 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 IMPDH1P20839 514 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 KRT20P35900 424 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 HTR6P50406 440 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 DGKQP52824 942 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 DCAF7P61962 342 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 HMGCS1Q01581 520 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 MGAT2Q10469 447 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 TRMT12Q53H54 448 aaKnown RBP14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 EIPR1Q53HC9 387 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 WIPI1Q5MNZ9 446 aaPredicted RBP14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 TIGD3Q6B0B8 471 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 DESI1Q6ICB0 168 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 SLC30A6Q6NXT4 461 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 ARSKQ6UWY0 536 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 NUP54Q7Z3B4 507 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 YRDCQ86U90 279 aaKnown RBP14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 LACC1Q8IV20 430 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 CCDC116Q8IYX3 515 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 CCNYL1Q8N7R7 359 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 GBP7Q8N8V2 638 aaPredicted RBP14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 SIMC1Q8NDZ2 872 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 TNIP2Q8NFZ5 429 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 OR9A2Q8NGT5 310 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 KCNA7Q96RP8 456 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 TRIB1Q96RU8 372 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 TIMP4Q99727 224 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 ACPTQ9BZG2 426 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 CLEC4MQ9H2X3 399 aaPredicted RBP14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 UBQLN3Q9H347 655 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 GALNT9Q9HCQ5 603 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 RPH3AQ9Y2J0 694 aaPredicted RBP14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 L3MBTL1Q9Y468 752 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 TIMM22Q9Y584 194 aa14.38□□□□□ -0.11
CHCHD3-204ENST00000457942 C2orf72A6NCS6 295 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 FRG2CA6NGY1 282 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 REM1O75628 298 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 CTAG2O75638 210 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 BCAS2O75934 225 aaPredicted RBP14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 FAM153BP0C7A2 387 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 DNASE1P24855 282 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 PTPN6P29350 595 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 IL12BP29460 328 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 TIA1P31483 386 aaKnown RBP eCLIP14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 ASCL1P50553 236 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 PRKAA2P54646 552 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 PKNOX1P55347 436 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 DLX5P56178 289 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 ADAM8P78325 824 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 RCAN2Q14206 197 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 SLC29A2Q14542 456 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 HEPACAMQ14CZ8 416 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 IMPG1Q17R60 797 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 FAM153CQ494X1 144 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 SPDYAQ5MJ70 313 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 FNDC7Q5VTL7 733 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 SCIMPQ6UWF3 145 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 SAMD14Q8IZD0 417 aaPredicted RBP14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 FAM83FQ8NEG4 500 aaPredicted RBP14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 RDH11Q8TC12 318 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 ACMSDQ8TDX5 336 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 KAT2AQ92830 837 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 HGDQ93099 445 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 ABTB1Q969K4 478 aaPredicted RBP14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 TMBIM1Q969X1 311 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 TMCO6Q96DC7 493 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 APIPQ96GX9 242 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 NODALQ96S42 347 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 UGT2B28Q9BY64 529 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 PRDM14Q9GZV8 571 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 MID1IP1Q9NPA3 183 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 SERHLQ9NQF3 203 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 ZNF639Q9UID6 485 aa14.37□□□□□ -0.11
CHCHD3-204ENST00000457942 KDM4EB2RXH2 506 aaPredicted RBP14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 SNPHO15079 494 aa14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 ICOSLGO75144 302 aa14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 UGT2B11O75310 529 aa14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 EPPINO95925 133 aa14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 GSTA1P08263 222 aa14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 MYL2P10916 166 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms