RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 UPK1AO00322 258 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 PLOD3O60568 738 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 COQ9O75208 318 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 P04436 131 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 CCL3P10147 92 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 PRPS1L1P21108 318 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 CNR1P21554 472 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 PIGAP37287 484 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 RFC3P40938 356 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 PPICP45877 212 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 UQCRFS1P47985 274 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 IDH3AP50213 366 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 CDK9P50750 372 aaKnown RBP9.29□□□□□ -0.92
RFX3-210ENST00000457373 NME5P56597 212 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 DCAF7P61962 342 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 ALDH6A1Q02252 535 aaKnown RBP9.29□□□□□ -0.92
RFX3-210ENST00000457373 ZNF155Q12901 538 aaPredicted RBP9.29□□□□□ -0.92
RFX3-210ENST00000457373 MRPL49Q13405 166 aaKnown RBP9.29□□□□□ -0.92
RFX3-210ENST00000457373 PGS1Q32NB8 556 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 ZNF791Q3KP31 576 aaPredicted RBP9.29□□□□□ -0.92
RFX3-210ENST00000457373 HSP90B2PQ58FF3 399 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 FHL5Q5TD97 284 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 SLC22A10Q63ZE4 541 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 FAM47EQ6ZV65 393 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 SZRD1Q7Z422 152 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 GALNT11Q8NCW6 608 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 DNAJB8Q8NHS0 232 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 ERP27Q96DN0 273 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 SPACA9Q96E40 222 aaPredicted RBP9.29□□□□□ -0.92
RFX3-210ENST00000457373 HSPBAP1Q96EW2 488 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 ZBED6CLQ96FA7 236 aaPredicted RBP9.29□□□□□ -0.92
RFX3-210ENST00000457373 ZNF764Q96H86 408 aaPredicted RBP9.29□□□□□ -0.92
RFX3-210ENST00000457373 HSH2DQ96JZ2 352 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 SGCZQ96LD1 299 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 MAGEB18Q96M61 343 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 C7orf26Q96N11 449 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 DUSP26Q9BV47 211 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 SACM1LQ9NTJ5 587 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 DEPPQ9NTK1 212 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 ATAD3AQ9NVI7 634 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 DDX18Q9NVP1 670 aaKnown RBP9.29□□□□□ -0.92
RFX3-210ENST00000457373 C19orf53Q9UNZ5 99 aaPredicted RBP9.29□□□□□ -0.92
RFX3-210ENST00000457373 USH1CQ9Y6N9 552 aa9.29□□□□□ -0.92
RFX3-210ENST00000457373 EXPH5Q8NEV8 1989 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 A0A087WV62 115 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 PINLYPA6NC86 204 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 ASPDHA6ND91 283 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 NPIPA5E9PKD4 350 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 PLOD2O00469 737 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 TP53I11O14683 189 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 CFLARO15519 480 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 DIAPH2O60879 1101 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 ERN1O75460 977 aaKnown RBP9.28□□□□□ -0.92
RFX3-210ENST00000457373 REM1O75628 298 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 WISP2O76076 250 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 SLITRK5O94991 958 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 CBX6O95503 412 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 C6orf47O95873 294 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 ABCB1P08183 1280 aaPredicted RBP9.28□□□□□ -0.92
RFX3-210ENST00000457373 ALDOCP09972 364 aaKnown RBP9.28□□□□□ -0.92
RFX3-210ENST00000457373 DRD5P21918 477 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 MST1P26927 711 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 ABCD3P28288 659 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 FRKP42685 505 aaPredicted RBP9.28□□□□□ -0.92
RFX3-210ENST00000457373 DNASE1L1P49184 302 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 CORO7P57737 925 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 FBXW4P57775 412 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 PLGLB1Q02325 96 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 PLCXD2Q0VAA5 305 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 NTRK2Q16620 822 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 EIF2S3LQ2VIR3 472 aaKnown RBP9.28□□□□□ -0.92
RFX3-210ENST00000457373 PRAMEF20Q5VT98 475 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 OR4F3Q6IEY1 312 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 MAVSQ7Z434 540 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 SPATA19Q7Z5L4 167 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 SLC44A2Q8IWA5 706 aaPredicted RBP9.28□□□□□ -0.92
RFX3-210ENST00000457373 RIMKLAQ8IXN7 391 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 DND1Q8IYX4 353 aaKnown RBP9.28□□□□□ -0.92
RFX3-210ENST00000457373 LRRC34Q8IZ02 419 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 GOLM1Q8NBJ4 401 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 NUP43Q8NFH3 380 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 OR2M7Q8NG81 312 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 OR10G3Q8NGC4 313 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 NR4A3Q92570 626 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 COQ8BQ96D53 544 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 OMA1Q96E52 524 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 MARK4Q96L34 752 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 OR52B2Q96RD2 323 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 BARD1Q99728 777 aaKnown RBP9.28□□□□□ -0.92
RFX3-210ENST00000457373 C3orf14Q9HBI5 128 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 EQTNQ9NQ60 294 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 ACSS1Q9NUB1 689 aaPredicted RBP9.28□□□□□ -0.92
RFX3-210ENST00000457373 AIG1Q9NVV5 245 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 NPIPA1Q9UND3 350 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 MAPRE3Q9UPY8 281 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 GPR55Q9Y2T6 319 aaPredicted RBP9.28□□□□□ -0.92
RFX3-210ENST00000457373 NINQ8N4C6 2090 aa9.28□□□□□ -0.92
RFX3-210ENST00000457373 A0A0G2JMM0 328 aa9.27□□□□□ -0.93
RFX3-210ENST00000457373 A0A1W2PPB8 328 aa9.27□□□□□ -0.93
RFX3-210ENST00000457373 A0A1W2PRS3 328 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms