RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 NR1H2P55055 460 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 SHC2P98077 582 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 LASP1Q14847 261 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 MAPK11Q15759 364 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 LIN52Q52LA3 116 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 MLIPQ5VWP3 458 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 RHBDD2Q6NTF9 364 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 TNFAIP8L2Q6P589 184 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 THAP5Q7Z6K1 395 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 OFCC1Q8IZS5 231 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 C8orf59Q8N0T1 100 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 DEPDC4Q8N2C3 294 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 OR7G2Q8NG99 324 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 OR9A4Q8NGU2 314 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 OR51Q1Q8NH59 317 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 OR14A16Q8NHC5 309 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 FAM110BQ8TC76 370 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 MAGEE2Q8TD90 523 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 PIGKQ92643 395 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 RIT1Q92963 219 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 MAL2Q969L2 176 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 ZNF501Q96CX3 271 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 RMND5BQ96G75 393 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 CNDP2Q96KP4 475 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 PRRC1Q96M27 445 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 PRRX2Q99811 253 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 B3GNT4Q9C0J1 378 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 SERHL2Q9H4I8 314 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 ZNF304Q9HCX3 659 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 ADAP2Q9NPF8 381 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 FAM118AQ9NWS6 357 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 NXT1Q9UKK6 140 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 ACSL6Q9UKU0 697 aa6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 GOLGA4Q13439 2230 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 ARID1BQ8NFD5 2236 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-210ENST00000454859 SCN3AQ9NY46 2000 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 A0A087WXM4 84 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 IGKV3D-11A0A0A0MRZ8 115 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 FAM149AA5PLN7 773 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 AGAP5A6NIR3 686 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 SGK494L7N484 410 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 FGF17O60258 216 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 KIAA0513O60268 411 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 RDH16O75452 317 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 OR5F1O95221 314 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 GADD45GO95257 159 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 EFNA1P20827 205 aaPredicted RBP6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 NT5EP21589 574 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 ACP1P24666 158 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 ADH7P40394 386 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 RPL5P46777 297 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 GTF2A1P52655 376 aaPredicted RBP6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 POU6F2P78424 691 aaPredicted RBP6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 SIM1P81133 766 aaPredicted RBP6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 BNIP3Q12983 259 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 ELAVL1Q15717 326 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 GPR19Q15760 415 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 GPAT3Q53EU6 434 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 RNF113BQ8IZP6 322 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 MORN4Q8NDC4 146 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 PHF10Q8WUB8 498 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 DAZLQ92904 295 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 FBXL20Q96IG2 436 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 SLC46A1Q96NT5 459 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 COL21A1Q96P44 957 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 MACROD1Q9BQ69 325 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 TUBA1CQ9BQE3 449 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 ZPBPQ9BS86 351 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 GRIP2Q9C0E4 1043 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 SLC26A1Q9H2B4 701 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 SLC38A1Q9H2H9 487 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 GAREM1Q9H706 876 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 CCNB1IP1Q9NPC3 277 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 ACER3Q9NUN7 267 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 LY6G6EA0A0G2JKS1 128 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 LOC100130705A0A1B0GUX0 176 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 C2orf92A0A1B0GVN3 265 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 GLOD5A6NK44 160 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 NTN3O00634 580 aaPredicted RBP6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 KHNYNO15037 678 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 SIGLEC6O43699 453 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 BRINP1O60477 761 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 LRP3O75074 770 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 CCNB2O95067 398 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 IGF2P01344 180 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 H1F0P07305 194 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 NGFRP08138 427 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 FGF5P12034 268 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 FBLP22087 321 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 GFERP55789 205 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 PPP1CAP62136 330 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 E2F1Q01094 437 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 ST3GAL3Q11203 375 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 SLC13A2Q13183 592 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 C16orf72Q14CZ0 275 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 C6orf52Q5T4I8 152 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 ZNF691Q5VV52 312 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 LAIR1Q6GTX8 287 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 TMEM154Q6P9G4 183 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms