RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 ASF1BQ9NVP2 202 aa25.79■■□□□ 1.72
SMARCC1-203ENST00000454240 ZIM2Q9NZV7 527 aa25.79■■□□□ 1.72
SMARCC1-203ENST00000454240 KLF13Q9Y2Y9 288 aaPredicted RBP25.79■■□□□ 1.72
SMARCC1-203ENST00000454240 GIMAP1-GIMAP5A0A087WTJ2 511 aa25.78■■□□□ 1.72
SMARCC1-203ENST00000454240 CAPN14A8MX76 684 aa25.78■■□□□ 1.72
SMARCC1-203ENST00000454240 NAGAP17050 411 aa25.78■■□□□ 1.72
SMARCC1-203ENST00000454240 CORO7P57737 925 aa25.78■■□□□ 1.72
SMARCC1-203ENST00000454240 PSG6Q00889 435 aa25.78■■□□□ 1.72
SMARCC1-203ENST00000454240 FAM174BQ3ZCQ3 159 aa25.78■■□□□ 1.72
SMARCC1-203ENST00000454240 NPSR1Q6W5P4 371 aa25.78■■□□□ 1.72
SMARCC1-203ENST00000454240 GRHL3Q8TE85 626 aa25.78■■□□□ 1.72
SMARCC1-203ENST00000454240 HOXB13Q92826 284 aaPredicted RBP25.78■■□□□ 1.72
SMARCC1-203ENST00000454240 FAM120BQ96EK7 910 aaKnown RBP25.78■■□□□ 1.72
SMARCC1-203ENST00000454240 GIMAP5Q96F15 307 aa25.78■■□□□ 1.72
SMARCC1-203ENST00000454240 CXorf36Q9H7Y0 433 aa25.78■■□□□ 1.72
SMARCC1-203ENST00000454240 NEUROD4Q9HD90 331 aa25.78■■□□□ 1.72
SMARCC1-203ENST00000454240 PRSS51A0A1B0GVH4 220 aa25.77■■□□□ 1.72
SMARCC1-203ENST00000454240 ASPDHA6ND91 283 aa25.77■■□□□ 1.72
SMARCC1-203ENST00000454240 SLC22A3O75751 556 aa25.77■■□□□ 1.72
SMARCC1-203ENST00000454240 S100A3P33764 101 aa25.77■■□□□ 1.72
SMARCC1-203ENST00000454240 MRPL19P49406 292 aaKnown RBP25.77■■□□□ 1.72
SMARCC1-203ENST00000454240 TMED10P49755 219 aaKnown RBP25.77■■□□□ 1.72
SMARCC1-203ENST00000454240 HBA1P69905 142 aa25.77■■□□□ 1.72
SMARCC1-203ENST00000454240 ZNF155Q12901 538 aaPredicted RBP25.77■■□□□ 1.72
SMARCC1-203ENST00000454240 ANXA8L1Q5VT79 327 aa25.77■■□□□ 1.72
SMARCC1-203ENST00000454240 SULF2Q8IWU5 870 aa25.77■■□□□ 1.72
SMARCC1-203ENST00000454240 PRR22Q8IZ63 422 aa25.77■■□□□ 1.72
SMARCC1-203ENST00000454240 CLECL1Q8IZS7 167 aa25.77■■□□□ 1.72
SMARCC1-203ENST00000454240 PAQR8Q8TEZ7 354 aa25.77■■□□□ 1.72
SMARCC1-203ENST00000454240 MIB2Q96AX9 1013 aa25.77■■□□□ 1.72
SMARCC1-203ENST00000454240 LMF2Q9BU23 707 aaKnown RBP25.77■■□□□ 1.72
SMARCC1-203ENST00000454240 TRIM4Q9C037 500 aa25.77■■□□□ 1.72
SMARCC1-203ENST00000454240 FGFR1OP2Q9NVK5 253 aa25.77■■□□□ 1.72
SMARCC1-203ENST00000454240 DCTN4Q9UJW0 460 aa25.77■■□□□ 1.72
SMARCC1-203ENST00000454240 CFLARO15519 480 aa25.76■■□□□ 1.71
SMARCC1-203ENST00000454240 CCL3P10147 92 aa25.76■■□□□ 1.71
SMARCC1-203ENST00000454240 MAP3K8P41279 467 aa25.76■■□□□ 1.71
SMARCC1-203ENST00000454240 PRKAG1P54619 331 aa25.76■■□□□ 1.71
SMARCC1-203ENST00000454240 PSPHP78330 225 aa25.76■■□□□ 1.71
SMARCC1-203ENST00000454240 PRR5P85299 388 aa25.76■■□□□ 1.71
SMARCC1-203ENST00000454240 SLC22A10Q63ZE4 541 aa25.76■■□□□ 1.71
SMARCC1-203ENST00000454240 FAM180AQ6UWF9 173 aa25.76■■□□□ 1.71
SMARCC1-203ENST00000454240 PNPLA5Q7Z6Z6 429 aaPredicted RBP25.76■■□□□ 1.71
SMARCC1-203ENST00000454240 MIER2Q8N344 545 aa25.76■■□□□ 1.71
SMARCC1-203ENST00000454240 VPS37AQ8NEZ2 397 aa25.76■■□□□ 1.71
SMARCC1-203ENST00000454240 OR10G3Q8NGC4 313 aa25.76■■□□□ 1.71
SMARCC1-203ENST00000454240 DNAJB8Q8NHS0 232 aa25.76■■□□□ 1.71
SMARCC1-203ENST00000454240 OMA1Q96E52 524 aa25.76■■□□□ 1.71
SMARCC1-203ENST00000454240 MS4A4EQ96PG1 132 aa25.76■■□□□ 1.71
SMARCC1-203ENST00000454240 ZBTB18Q99592 522 aa25.76■■□□□ 1.71
SMARCC1-203ENST00000454240 DEPPQ9NTK1 212 aa25.76■■□□□ 1.71
SMARCC1-203ENST00000454240 FAM120CQ9NX05 1096 aaKnown RBP25.76■■□□□ 1.71
SMARCC1-203ENST00000454240 CHCHD2Q9Y6H1 151 aaPredicted RBP25.76■■□□□ 1.71
SMARCC1-203ENST00000454240 TTC36A6NLP5 189 aa25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 C9JVG2 144 aa25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 KLRC4-KLRK1H3BQV0 150 aa25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 PEX1O43933 1283 aa25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 PPM1BO75688 479 aa25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 PGRP06401 933 aa25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 ABCB1P08183 1280 aaPredicted RBP25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 VIMP08670 466 aaKnown RBP25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 PLA2G2AP14555 144 aa25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 CNR1P21554 472 aa25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 ZFP36L2P47974 494 aaKnown RBP25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 CCT3P49368 545 aaKnown RBP25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 DGKQP52824 942 aa25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 FBXW4P57775 412 aa25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 PMP22Q01453 160 aa25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 ZNF324BQ6AW86 544 aaPredicted RBP25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 SLC44A2Q8IWA5 706 aaPredicted RBP25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 SLC34A3Q8N130 599 aa25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 BCORP1Q8N888 145 aa25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 FAM98AQ8NCA5 519 aaKnown RBP25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 FAM13CQ8NE31 585 aa25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 FAR1Q8WVX9 515 aa25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 FRMD6Q96NE9 622 aa25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 AGPAT4Q9NRZ5 378 aa25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 SACM1LQ9NTJ5 587 aa25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 ZCCHC3Q9NUD5 404 aaKnown RBP25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 SNX8Q9Y5X2 465 aa25.75■■□□□ 1.71
SMARCC1-203ENST00000454240 FOXK1P85037 733 aa25.74■■□□□ 1.71
SMARCC1-203ENST00000454240 PLCXD2Q0VAA5 305 aa25.74■■□□□ 1.71
SMARCC1-203ENST00000454240 ZNHIT3Q15649 155 aaPredicted RBP25.74■■□□□ 1.71
SMARCC1-203ENST00000454240 ZCCHC12Q6PEW1 402 aa25.74■■□□□ 1.71
SMARCC1-203ENST00000454240 WDR53Q7Z5U6 358 aaPredicted RBP25.74■■□□□ 1.71
SMARCC1-203ENST00000454240 ANKRD46Q86W74 232 aa25.74■■□□□ 1.71
SMARCC1-203ENST00000454240 SFXN5Q8TD22 340 aa25.74■■□□□ 1.71
SMARCC1-203ENST00000454240 EQTNQ9NQ60 294 aa25.74■■□□□ 1.71
SMARCC1-203ENST00000454240 CNIH4Q9P003 139 aa25.74■■□□□ 1.71
SMARCC1-203ENST00000454240 NINQ8N4C6 2090 aa25.74■■□□□ 1.71
SMARCC1-203ENST00000454240 TP53I11O14683 189 aa25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 CRYABP02511 175 aaKnown RBP25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 P04436 131 aa25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 IL6P05231 212 aa25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 MEOX1P50221 254 aa25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 GPR85P60893 370 aa25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 IRX1P78414 480 aaPredicted RBP25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 GAB1Q13480 694 aa25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 IGFBP7Q16270 282 aa25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 CYP27C1Q4G0S4 372 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms