RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 EXOC3L1Q86VI1 746 aa13.35□□□□□ -0.27
HSPG2-207ENST00000453796 TWIST2Q8WVJ9 160 aa13.35□□□□□ -0.27
HSPG2-207ENST00000453796 OMA1Q96E52 524 aa13.35□□□□□ -0.27
HSPG2-207ENST00000453796 ZNF764Q96H86 408 aaPredicted RBP13.35□□□□□ -0.27
HSPG2-207ENST00000453796 ZNF597Q96LX8 424 aa13.35□□□□□ -0.27
HSPG2-207ENST00000453796 RILPQ96NA2 401 aa13.35□□□□□ -0.27
HSPG2-207ENST00000453796 ZIM3Q96PE6 472 aa13.35□□□□□ -0.27
HSPG2-207ENST00000453796 BBS4Q96RK4 519 aa13.35□□□□□ -0.27
HSPG2-207ENST00000453796 NODALQ96S42 347 aa13.35□□□□□ -0.27
HSPG2-207ENST00000453796 CCT7Q99832 543 aa13.35□□□□□ -0.27
HSPG2-207ENST00000453796 STMN4Q9H169 189 aaPredicted RBP13.35□□□□□ -0.27
HSPG2-207ENST00000453796 UBQLN3Q9H347 655 aa13.35□□□□□ -0.27
HSPG2-207ENST00000453796 TP63Q9H3D4 680 aaPredicted RBP13.35□□□□□ -0.27
HSPG2-207ENST00000453796 GLIPR2Q9H4G4 154 aa13.35□□□□□ -0.27
HSPG2-207ENST00000453796 FOLH1BQ9HBA9 442 aa13.35□□□□□ -0.27
HSPG2-207ENST00000453796 EML4Q9HC35 981 aaKnown RBP13.35□□□□□ -0.27
HSPG2-207ENST00000453796 SSU72Q9NP77 194 aaKnown RBP13.35□□□□□ -0.27
HSPG2-207ENST00000453796 ACKR4Q9NPB9 350 aa13.35□□□□□ -0.27
HSPG2-207ENST00000453796 MIEF1Q9NQG6 463 aa13.35□□□□□ -0.27
HSPG2-207ENST00000453796 TRAF6Q9Y4K3 522 aa13.35□□□□□ -0.27
HSPG2-207ENST00000453796 HCFC1P51610 2035 aa13.35□□□□□ -0.27
HSPG2-207ENST00000453796 PRSS44E7EML9 344 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 NPIPA2E9PIF3 369 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 NPIPA3F8WFD2 350 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 PLOD2O00469 737 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 PIP5K1BO14986 540 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 RGS16O15492 202 aaPredicted RBP13.34□□□□□ -0.27
HSPG2-207ENST00000453796 HCN1O60741 890 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 TBX19O60806 448 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 UGT2B11O75310 529 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 SLITRK5O94991 958 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 SNX4O95219 450 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 PSMG1O95456 288 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 CHEK2O96017 543 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 JUNP05412 331 aaKnown RBP13.34□□□□□ -0.27
HSPG2-207ENST00000453796 TUBBP07437 444 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 IFI6P09912 130 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 SMSP52788 366 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 GXYLT1Q4G148 440 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 ZNF385BQ569K4 471 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 SH2D4BQ5SQS7 431 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 TMEM198Q66K66 360 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 NUP54Q7Z3B4 507 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 SLC34A3Q8N130 599 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 EID3Q8N140 333 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 RPRMLQ8N4K4 120 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 RNF138Q8WVD3 245 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 TMEM41AQ96HV5 264 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 AMDHD1Q96NU7 426 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 PNPLA3Q9NST1 481 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 SPRR3Q9UBC9 169 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 ZDHHC2Q9UIJ5 367 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 TMED5Q9Y3A6 229 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 PCNX3Q9H6A9 2034 aa13.34□□□□□ -0.27
HSPG2-207ENST00000453796 TRGV5A0A0B4J1U4 118 aa13.33□□□□□ -0.28
HSPG2-207ENST00000453796 BCKDKO14874 412 aa13.33□□□□□ -0.28
HSPG2-207ENST00000453796 CTIFO43310 598 aaKnown RBP13.33□□□□□ -0.28
HSPG2-207ENST00000453796 TSPAN2O60636 221 aa13.33□□□□□ -0.28
HSPG2-207ENST00000453796 ERN1O75460 977 aaKnown RBP13.33□□□□□ -0.28
HSPG2-207ENST00000453796 DHRS4L1P0CG22 281 aa13.33□□□□□ -0.28
HSPG2-207ENST00000453796 NTSP30990 170 aa13.33□□□□□ -0.28
HSPG2-207ENST00000453796 MC3RP41968 323 aa13.33□□□□□ -0.28
HSPG2-207ENST00000453796 FRKP42685 505 aaPredicted RBP13.33□□□□□ -0.28
HSPG2-207ENST00000453796 SERPINB4P48594 390 aa13.33□□□□□ -0.28
HSPG2-207ENST00000453796 MAN2A2P49641 1150 aa13.33□□□□□ -0.28
HSPG2-207ENST00000453796 NCBP2P52298 156 aaKnown RBP eCLIP13.33□□□□□ -0.28
HSPG2-207ENST00000453796 CORO7P57737 925 aa13.33□□□□□ -0.28
HSPG2-207ENST00000453796 RPL38P63173 70 aaKnown RBP13.33□□□□□ -0.28
HSPG2-207ENST00000453796 RPP38P78345 283 aaKnown RBP13.33□□□□□ -0.28
HSPG2-207ENST00000453796 PSG6Q00889 435 aa13.33□□□□□ -0.28
HSPG2-207ENST00000453796 PLCXD2Q0VAA5 305 aa13.33□□□□□ -0.28
HSPG2-207ENST00000453796 PDE7AQ13946 482 aa13.33□□□□□ -0.28
HSPG2-207ENST00000453796 ZNF630Q2M218 657 aaPredicted RBP13.33□□□□□ -0.28
HSPG2-207ENST00000453796 SP5Q6BEB4 398 aaPredicted RBP13.33□□□□□ -0.28
HSPG2-207ENST00000453796 OR2L13Q8N349 312 aa13.33□□□□□ -0.28
HSPG2-207ENST00000453796 NEIL3Q8TAT5 605 aa13.33□□□□□ -0.28
HSPG2-207ENST00000453796 SLC35A4Q96G79 324 aa13.33□□□□□ -0.28
HSPG2-207ENST00000453796 C3orf30Q96M34 536 aa13.33□□□□□ -0.28
HSPG2-207ENST00000453796 JSRP1Q96MG2 331 aaPredicted RBP13.33□□□□□ -0.28
HSPG2-207ENST00000453796 TAS2R9Q9NYW1 312 aa13.33□□□□□ -0.28
HSPG2-207ENST00000453796 TNFRSF10DQ9UBN6 386 aa13.33□□□□□ -0.28
HSPG2-207ENST00000453796 C19orf53Q9UNZ5 99 aaPredicted RBP13.33□□□□□ -0.28
HSPG2-207ENST00000453796 NUP214P35658 2090 aaPredicted RBP13.33□□□□□ -0.28
HSPG2-207ENST00000453796 ADGRG4Q8IZF6 3080 aa13.33□□□□□ -0.28
HSPG2-207ENST00000453796 MED12Q93074 2177 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 OR6C70A6NIJ9 312 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 UPK1AO00322 258 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 ICOSLGO75144 302 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 CLDN14O95500 239 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 GDF1P27539 372 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 HTR1EP28566 365 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 SNTA1Q13424 505 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 MPP2Q14168 576 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 CEP85LQ5SZL2 805 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 RTL6Q6ICC9 239 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 TMEM107Q6UX40 140 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 DDIASQ8IXT1 998 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 OR5M9Q8NGP3 310 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 AGR3Q8TD06 166 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 GFM2Q969S9 779 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms