RNA–Protein interactions for RNA: ENST00000452666.3

VPS8-212, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-212ENST00000452666 FOXE1O00358 373 aaPredicted RBP3.1□□□□□ -1.91
VPS8-212ENST00000452666 ARPC3O15145 178 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 NDUFS4O43181 175 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 SPINT2O43291 252 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 B4GAT1O43505 415 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 DUX1O43812 170 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 ZIC3O60481 467 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 RPS6KA5O75582 802 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 TM7SF2O76062 418 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 CIAO1O76071 339 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 LUC7L3O95232 432 aaKnown RBP3.1□□□□□ -1.91
VPS8-212ENST00000452666 SNAI1O95863 264 aaPredicted RBP3.1□□□□□ -1.91
VPS8-212ENST00000452666 EGFP01133 1207 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 MT-ND1P03886 318 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 KRT16P08779 473 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 ANXA4P09525 319 aaPredicted RBP3.1□□□□□ -1.91
VPS8-212ENST00000452666 DBTP11182 482 aaKnown RBP3.1□□□□□ -1.91
VPS8-212ENST00000452666 ETS2P15036 469 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 GNSP15586 552 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 GM2AP17900 193 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 POLR2CP19387 275 aaPredicted RBP3.1□□□□□ -1.91
VPS8-212ENST00000452666 HNF1AP20823 631 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 S1PR1P21453 382 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 PSMB4P28070 264 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 SLC6A6P31641 620 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 FCGR2BP31994 310 aaPredicted RBP3.1□□□□□ -1.91
VPS8-212ENST00000452666 STX2P32856 288 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 FEN1P39748 380 aaKnown RBP3.1□□□□□ -1.91
VPS8-212ENST00000452666 APOBEC1P41238 236 aaKnown RBP3.1□□□□□ -1.91
VPS8-212ENST00000452666 CCNG1P51959 295 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 CDH4P55283 916 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 GPX6P59796 221 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 VSNL1P62760 191 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 CYP24A1Q07973 514 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 FOXM1Q08050 763 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 TRAF2Q12933 501 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 MAD2L1Q13257 205 aaPredicted RBP3.1□□□□□ -1.91
VPS8-212ENST00000452666 TNK1Q13470 666 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 NAB1Q13506 487 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 FLOT2Q14254 428 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 GPR18Q14330 331 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 GCKRQ14397 625 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 EFNB3Q15768 340 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 STX1AQ16623 288 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 TATDN3Q17R31 274 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 KLHL38Q2WGJ6 581 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 POM121L1PQ3SYA9 428 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 PTPN20Q4JDL3 420 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 XKR4Q5GH76 650 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 OTUD1Q5VV17 481 aaPredicted RBP3.1□□□□□ -1.91
VPS8-212ENST00000452666 RNLSQ5VYX0 342 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 TTC23Q5W5X9 447 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 SPOPLQ6IQ16 392 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 RNASEKQ6P5S7 137 aaKnown RBP3.1□□□□□ -1.91
VPS8-212ENST00000452666 RFWD3Q6PCD5 774 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 FAM151BQ6UXP7 276 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 WASH2PQ6VEQ5 465 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 PLEKHG7Q6ZR37 379 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 SSX9Q7RTT3 188 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 CTU1Q7Z7A3 348 aaKnown RBP3.1□□□□□ -1.91
VPS8-212ENST00000452666 CCDC190Q86UF4 302 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 SLC51BQ86UW2 128 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 ZC3HC1Q86WB0 502 aaKnown RBP3.1□□□□□ -1.91
VPS8-212ENST00000452666 TMEM173Q86WV6 379 aaPredicted RBP3.1□□□□□ -1.91
VPS8-212ENST00000452666 SFR1Q86XK3 245 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 ZNF677Q86XU0 584 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 GCNT2Q8N0V5 402 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 FAM86B1Q8N7N1 296 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 C19orf18Q8NEA5 215 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 OR2L3Q8NG85 312 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 OR4A16Q8NH70 328 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 RHEBL1Q8TAI7 183 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 TBC1D16Q8TBP0 767 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 GIPC3Q8TF64 312 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 ZNF473Q8WTR7 871 aaKnown RBP3.1□□□□□ -1.91
VPS8-212ENST00000452666 U2AF1L4Q8WU68 220 aaKnown RBP3.1□□□□□ -1.91
VPS8-212ENST00000452666 PIGBQ92521 554 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 PHYHIPQ92561 330 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 RAD54LQ92698 747 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 MRGPRFQ96AM1 343 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 OMA1Q96E52 524 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 OTUB1Q96FW1 271 aaPredicted RBP3.1□□□□□ -1.91
VPS8-212ENST00000452666 GRAMD2BQ96HH9 432 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 URB1-AS1Q96HZ7 61 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 GLT1D1Q96MS3 346 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 DUX5Q96PT3 197 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 PRMT1Q99873 361 aaKnown RBP3.1□□□□□ -1.91
VPS8-212ENST00000452666 CTRCQ99895 268 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 WRAP53Q9BUR4 548 aaKnown RBP3.1□□□□□ -1.91
VPS8-212ENST00000452666 C20orf24Q9BUV8 137 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 PAPOLGQ9BWT3 736 aaKnown RBP3.1□□□□□ -1.91
VPS8-212ENST00000452666 TEKT3Q9BXF9 490 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 IDI2Q9BXS1 227 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 GSDMCQ9BYG8 508 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 ANKRD60Q9BZ19 345 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 DERL2Q9GZP9 239 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 DHX33Q9H6R0 707 aaKnown RBP3.1□□□□□ -1.91
VPS8-212ENST00000452666 MAGEF1Q9HAY2 307 aa3.1□□□□□ -1.91
VPS8-212ENST00000452666 SEBOXQ9HB31 216 aaPredicted RBP3.1□□□□□ -1.91
VPS8-212ENST00000452666 PLAC1Q9HBJ0 212 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms