RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 ZNF362Q5T0B9 420 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 SAXO2Q658L1 398 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 IL31Q6EBC2 164 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 C22orf42Q6IC83 251 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ETFRF1Q6IPR1 90 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 SLC30A6Q6NXT4 461 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ZNF730Q6ZMV8 503 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 LIMS2Q7Z4I7 341 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 LDB1Q86U70 411 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 ZNF546Q86UE3 836 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 XYLT1Q86Y38 959 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 LRRC56Q8IYG6 542 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 LILRA2Q8N149 483 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 C7orf31Q8N865 590 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 HSD17B11Q8NBQ5 300 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 PLA2G15Q8NCC3 412 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 OR5M3Q8NGP4 307 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 OR1J1Q8NGS3 322 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 DCUN1D4Q92564 292 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 CMTM7Q96FZ5 175 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 HPDLQ96IR7 371 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 HRASLS5Q96KN8 279 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 SFXN2Q96NB2 322 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 PEBP4Q96S96 227 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 B3GNT4Q9C0J1 378 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 GPR88Q9GZN0 384 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 MCOLN1Q9GZU1 580 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 SMDT1Q9H4I9 107 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ZNF768Q9H5H4 540 aaKnown RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 MVB12BQ9H7P6 319 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 SDR39U1Q9NRG7 319 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 DCAF13Q9NV06 445 aaKnown RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 SMPD4Q9NXE4 827 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 DPP7Q9UHL4 492 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 SLCO3A1Q9UIG8 710 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 FBXL21Q9UKT6 434 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ATAD5Q96QE3 1844 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 A0A1W2PS29 197 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 OR6C75A6NL08 312 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 A8MUA0 341 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 NCF1CA8MVU1 366 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 TRDCB7Z8K6 153 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 WASH3PC4AMC7 463 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 H7BY64 318 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 H7C417 338 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 H7C4K7 107 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 I6L893 689 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 M0QYT0 321 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 DLX3O60479 287 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 NSA2O95478 260 aaKnown RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 SLC16A8O95907 504 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 CYB5AP00167 134 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 IFNA5P01569 189 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 C8GP07360 202 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 HOXC6P09630 235 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 FAM86B2P0C5J1 330 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 OR5AC1P0C628 307 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ARP10275 920 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 NR2C1P13056 603 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 OSMP13725 252 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 HSD3B1P14060 373 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 IFNGR1P15260 489 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ZNF10P21506 573 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 BCKDHBP21953 392 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 CXCR1P25024 350 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 HSD3B2P26439 372 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 RBMXP38159 391 aaKnown RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 GYG1P46976 350 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 MTNR1AP48039 350 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ZNF41P51814 821 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 F2RL1P55085 397 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 RGS8P57771 180 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 UBE2KP61086 200 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 OSTNP61366 133 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 SNRPGP62308 76 aaKnown RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 SCAPQ12770 1279 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 PCBP1Q15365 356 aaKnown RBP eCLIP2.1□□□□□ -2.07
USP53-202ENST00000450251 ETFDHQ16134 617 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 DPYSL2Q16555 572 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 TUSC1Q2TAM9 212 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 TECRLQ5HYJ1 363 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 PABPC1L2AQ5JQF8 200 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 COL5A1-AS1Q5SY13 56 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 FAM109BQ6ICB4 259 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 C17orf107Q6ZR85 190 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ACOT7LQ6ZUV0 252 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 COX15Q7KZN9 410 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 GRINAQ7Z429 371 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 C12orf40Q86WS4 652 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 TMC8Q8IU68 726 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ZNF584Q8IVC4 421 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 AQP11Q8NBQ7 271 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 OR52N2Q8NGI0 321 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 OR8D4Q8NGM9 314 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 BBS10Q8TAM1 723 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 NEK7Q8TDX7 302 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 PXYLP1Q8TE99 480 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 PAQR8Q8TEZ7 354 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 TRAPPC12Q8WVT3 735 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 TSEN15Q8WW01 171 aaKnown RBP2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms