RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 SCGB2B2Q4G0G5 96 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 LRIF1Q5T3J3 769 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 LRRN1Q6UXK5 716 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 DCAF4L2Q8NA75 395 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 OR52I1Q8NGK6 324 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 TRIB2Q92519 343 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 PLD4Q96BZ4 506 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 EID2BQ96D98 161 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 ECHDC3Q96DC8 303 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 MICU1Q9BPX6 476 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 IRAK3Q9Y616 596 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 LRRC72A6NJI9 287 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 YY2O15391 372 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 PRICKLE3O43900 615 aaPredicted RBP11.73□□□□□ -0.53
UBE3B-204ENST00000449510 GPR37L1O60883 481 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 SIX6O95475 246 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 IGLV3-25P01717 112 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 S100A9P06702 114 aaKnown RBP11.73□□□□□ -0.53
UBE3B-204ENST00000449510 MNDAP41218 407 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 RFX2P48378 723 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 PSMD4P55036 377 aaKnown RBP11.73□□□□□ -0.53
UBE3B-204ENST00000449510 STXBP1P61764 594 aaKnown RBP11.73□□□□□ -0.53
UBE3B-204ENST00000449510 ACVR1Q04771 509 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 MLLT11Q13015 90 aaPredicted RBP11.73□□□□□ -0.53
UBE3B-204ENST00000449510 CLLU1OSQ5K130 101 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 METTL2BQ6P1Q9 378 aaKnown RBP11.73□□□□□ -0.53
UBE3B-204ENST00000449510 FOXRED2Q8IWF2 684 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 ZFAND1Q8TCF1 268 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 SMPDL3AQ92484 453 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 TRIB3Q96RU7 358 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 BARHL1Q9BZE3 327 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 SLC25A18Q9H1K4 315 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 MVB12BQ9H7P6 319 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 GPN1Q9HCN4 374 aaPredicted RBP11.73□□□□□ -0.53
UBE3B-204ENST00000449510 TEX10Q9NXF1 929 aaPredicted RBP11.73□□□□□ -0.53
UBE3B-204ENST00000449510 CNOT2Q9NZN8 540 aaKnown RBP11.73□□□□□ -0.53
UBE3B-204ENST00000449510 KCNN3Q9UGI6 736 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 CACNG2Q9Y698 323 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 ARPC1BO15143 372 aaKnown RBP11.73□□□□□ -0.53
UBE3B-204ENST00000449510 RAD1O60671 282 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 IL1AP01583 271 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 HBQ1P09105 142 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 CBSLP0DN79 551 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 UQCRC2P22695 453 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 MAT2AP31153 395 aaKnown RBP11.73□□□□□ -0.53
UBE3B-204ENST00000449510 CBSP35520 551 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 SPINT3P49223 89 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 SF3A2Q15428 464 aaKnown RBP11.73□□□□□ -0.53
UBE3B-204ENST00000449510 ZNF782Q6ZMW2 699 aaPredicted RBP11.73□□□□□ -0.53
UBE3B-204ENST00000449510 SLITRK4Q8IW52 837 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 ZNF527Q8NB42 609 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 ZNF680Q8NEM1 530 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 CREB3L4Q8TEY5 395 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 NXPE2Q96DL1 559 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 TREX2Q9BQ50 279 aaPredicted RBP11.73□□□□□ -0.53
UBE3B-204ENST00000449510 SLC6A15Q9H2J7 730 aa11.73□□□□□ -0.53
UBE3B-204ENST00000449510 A0A0G2JPF8 293 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 IRGMA1A4Y4 181 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 HNRNPCL3B7ZW38 293 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 S100A6P06703 90 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 HNRNPCL4P0DMR1 293 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 POU3F3P20264 500 aaPredicted RBP11.72□□□□□ -0.53
UBE3B-204ENST00000449510 ITGA3P26006 1051 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 PITPNBP48739 271 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 FABP5Q01469 135 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 CDKL4Q5MAI5 379 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 FAM46CQ5VWP2 391 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 C22orf39Q6P5X5 142 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 GDPGP1Q6ZNW5 385 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 LINC00299Q6ZSB3 139 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 TMEM173Q86WV6 379 aaPredicted RBP11.72□□□□□ -0.53
UBE3B-204ENST00000449510 ZBTB44Q8NCP5 570 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 CXorf36Q9H7Y0 433 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 SYNPO2LQ9H987 977 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 HPF1Q9NWY4 346 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 FARSAQ9Y285 508 aaKnown RBP11.72□□□□□ -0.53
UBE3B-204ENST00000449510 HYKKA2RU49 373 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 RGS11O94810 467 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 OAZ2O95190 189 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 ACP5P13686 325 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 NT5EP21589 574 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 ZNF750Q32MQ0 723 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 TP53I3Q53FA7 332 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 MEDAGQ5VYS4 303 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 RPTNQ6XPR3 784 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 C17orf107Q6ZR85 190 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 FAM124AQ86V42 546 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 TMC8Q8IU68 726 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 GIMAP1Q8WWP7 306 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 ORAI1Q96D31 301 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 TRMT61AQ96FX7 289 aaKnown RBP11.72□□□□□ -0.53
UBE3B-204ENST00000449510 C7orf34Q96L11 122 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 DPH1Q9BZG8 443 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 MED11Q9P086 117 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 PHF11Q9UIL8 331 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 CLEC4EQ9ULY5 219 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 OR10H1Q9Y4A9 318 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 NPIPA5A0A0B4J1W7 369 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 ANKRD61A6NGH8 418 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 NPIPA7E9PJI5 369 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms