RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 SLC6A1P30531 599 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 ATP12AP54707 1039 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 KIAA1024LP59773 190 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 PPP3R1P63098 170 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 HTRA4P83105 476 aaPredicted RBP12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 SPHARQ15513 63 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 SGCAQ16586 387 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 C21orf62-AS1Q17RA5 79 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 CPXM2Q8N436 756 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 HJURPQ8NCD3 748 aaPredicted RBP12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 TXNL4BQ9NX01 149 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 BTNL2Q9UIR0 455 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 EXO1Q9UQ84 846 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 SLC22A7Q9Y694 548 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 CARNS1A5YM72 827 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 EIF1BO60739 113 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 GABRB1P18505 474 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 PCGF2P35227 344 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 EIF1P41567 113 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 GPR176Q14439 515 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 LIPKQ5VXJ0 399 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 LIPJQ5W064 366 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 ANKRD46Q86W74 232 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 DCAF4L2Q8NA75 395 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 ZNF784Q8NCA9 323 aaPredicted RBP12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 CLP1Q92989 425 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 TCEAL3Q969E4 200 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 TMEM203Q969S6 136 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 SCMH1Q96GD3 660 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 FEVQ99581 238 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 DUSP26Q9BV47 211 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 TPT1P8Q9HAU6 139 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 CLEC4EQ9ULY5 219 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 LOC105369274A0A096LPK9 316 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 A0A1B0GVI7 797 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 SERTM1A2A2V5 107 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 SGK494L7N484 410 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 TRBC1P01850 177 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 SERPINA4P29622 427 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 MEDAGQ5VYS4 303 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 PDE12Q6L8Q7 609 aaKnown RBP12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 NOXRED1Q6NXP6 359 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 APCDD1Q8J025 514 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 OR4N4Q8N0Y3 316 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 PIH1D2Q8WWB5 315 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 MTFMTQ96DP5 389 aaKnown RBP12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 SLC6A13Q9NSD5 602 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 NUDT15Q9NV35 164 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 ZDHHC3Q9NYG2 299 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 MBD2Q9UBB5 411 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 C7orf66A4D0T2 115 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 GAPDHSO14556 408 aaPredicted RBP12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 SOCS5O75159 536 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 CHRM5P08912 532 aaPredicted RBP12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 LCN1P31025 176 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 NFATC2Q13469 925 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 NCF4Q15080 339 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 PAN3Q58A45 887 aaKnown RBP12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 GCNT6Q5T4J0 391 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 ASB18Q6ZVZ8 466 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 HS6ST3Q8IZP7 471 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 OR2T35Q8NGX2 323 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 MOSPD2Q8NHP6 518 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 GEMIN6Q8WXD5 167 aaKnown RBP12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 POLR2J2Q9GZM3 115 aaKnown RBP12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 HCN2Q9UL51 889 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 CCL27Q9Y4X3 112 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 RNF215Q9Y6U7 377 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 SIGLEC5O15389 551 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 C4BPBP20851 252 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 ACRV1P26436 265 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 SIGLEC14Q08ET2 396 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 HES5Q5TA89 166 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 TEFMQ96QE5 360 aaKnown RBP12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 SLC38A3Q99624 504 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 DLL4Q9NR61 685 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 VPS29Q9UBQ0 182 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 CLEC2DQ9UHP7 191 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 SCP2D1Q9UJQ7 156 aa12.73□□□□□ -0.37
SYNGAP1-204ENST00000449372 ALPK3Q96L96 1907 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 TRBV23-1A0A0A0MS06 115 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 K7ERQ8 282 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 EFCAB14O75071 495 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 CCNB2O95067 398 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 PDYNP01213 254 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 CAV3P56539 151 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 ERVK-25P63136 954 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 PTCHD4Q6ZW05 846 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 RAB11FIP2Q7L804 512 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 SLC16A13Q7RTY0 426 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 OR8J2Q8NGG1 315 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 MRPL48Q96GC5 212 aaKnown RBP12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 TEX12Q9BXU0 123 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 ACPTQ9BZG2 426 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 SLC6A14Q9UN76 642 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 FCF1Q9Y324 198 aaKnown RBP12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 C5orf58C9J3I9 102 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 EIF3GO75821 320 aaKnown RBP eCLIP12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 S100A9P06702 114 aaKnown RBP12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 MTAPQ13126 283 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms