RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 ZNF223Q9UK11 482 aaPredicted RBP12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 EIF3LQ9Y262 564 aaKnown RBP12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 CLDN16Q9Y5I7 305 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 HRH3Q9Y5N1 445 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 GPR45Q9Y5Y3 372 aa12.7□□□□□ -0.38
PDLIM2-213ENST00000448520 A0A1W2PS29 197 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 OR14I1A6ND48 311 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 CYR61O00622 381 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 ANKRD28O15084 1053 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 OR2J2O76002 312 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 IGFBP2P18065 325 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 CNR1P21554 472 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 MAPK1P28482 360 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 IL12AP29459 219 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 ALDH9A1P49189 494 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 TNFRSF17Q02223 184 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 PLGLB1Q02325 96 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 ID2Q02363 134 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 C2orf80Q0P641 193 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 STX4Q12846 297 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 SERTAD2Q14140 314 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 SMU1Q2TAY7 513 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 GXYLT1Q4G148 440 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 ZNF385BQ569K4 471 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 NDUFAF5Q5TEU4 345 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 FAM71E1Q6IPT2 247 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 IL20RBQ6UXL0 311 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 CLNKQ7Z7G1 428 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 MARVELD2Q8N4S9 558 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 OR2M7Q8NG81 312 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 BCAS4Q8TDM0 211 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 STON2Q8WXE9 905 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 METTL2AQ96IZ6 378 aaKnown RBP12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 ALOXE3Q9BYJ1 711 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 NMUR2Q9GZQ4 415 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 ZDHHC11Q9H8X9 412 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 LYRM4Q9HD34 91 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 MYNNQ9NPC7 610 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 LYARQ9NX58 379 aaKnown RBP12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 ASIC5Q9NY37 505 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 RNF6Q9Y252 685 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 TMED5Q9Y3A6 229 aa12.69□□□□□ -0.38
PDLIM2-213ENST00000448520 TMEM200CA6NKL6 621 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 TGFBR3LH3BV60 316 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 NDUFAB1O14561 156 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 BCKDKO14874 412 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 PGRMC2O15173 223 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 PROM1O43490 865 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 PRKNO60260 465 aaPredicted RBP12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 NR2F6P10588 404 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 PRPS2P11908 318 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 TNNI3P19429 210 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 EFNA1P20827 205 aaPredicted RBP12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 PPP2R1BP30154 601 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 PMPCAQ10713 525 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 MAD2L1Q13257 205 aaPredicted RBP12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 BIKQ13323 160 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 ZNF750Q32MQ0 723 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 RTL4Q6ZR62 310 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 GK5Q6ZS86 529 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 OR4N5Q8IXE1 308 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 DMRTC2Q8IXT2 367 aaPredicted RBP12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 GOLM1Q8NBJ4 401 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 OR7A2PQ8NGA2 310 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 OR14A16Q8NHC5 309 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 RASL10BQ96S79 203 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 FAM173AQ9BQD7 235 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 SAR1AQ9NR31 198 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 DEPPQ9NTK1 212 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 RYDENQ9NUL5 291 aaKnown RBP12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 ARMCX1Q9P291 453 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 PHF11Q9UIL8 331 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 ARL2BPQ9Y2Y0 163 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 PCDHA9Q9Y5H5 950 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 SPACA6W5XKT8 324 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 NINQ8N4C6 2090 aa12.68□□□□□ -0.38
PDLIM2-213ENST00000448520 CELSR1Q9NYQ6 3014 aa12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 NPIPA2E9PIF3 369 aa12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 NPIPA3F8WFD2 350 aa12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 WWP2O00308 870 aa12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 LDB3O75112 727 aa12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 TOXO94900 526 aa12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 OR6B1O95007 311 aa12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 HOXD4P09016 255 aaPredicted RBP12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 IDO1P14902 403 aa12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 GPX3P22352 226 aa12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 SOX3P41225 446 aa12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 ZFP36L2P47974 494 aaKnown RBP12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 CLDN8P56748 225 aa12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 TFF3Q07654 80 aa12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 RPS6KA2Q15349 733 aa12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 PDCD4Q53EL6 469 aaKnown RBP12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 EMC4Q5J8M3 183 aa12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 GKAP1Q5VSY0 366 aaPredicted RBP12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 OPN5Q6U736 354 aa12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 MTDHQ86UE4 582 aaKnown RBP12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 CCDC197Q8NCU1 140 aa12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 OR5M3Q8NGP4 307 aa12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 PTPMT1Q8WUK0 201 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms